RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SLC39A4Q6P5W5 647 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 TRMT10CQ7L0Y3 403 aaKnown RBP11.69□□□□□ -0.54
DDR1-240ENST00000454612 PCGF5Q86SE9 256 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 NDRG1Q92597 394 aaKnown RBP11.69□□□□□ -0.54
DDR1-240ENST00000454612 MBOAT7Q96N66 472 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 GPR88Q9GZN0 384 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 ZCWPW1Q9H0M4 648 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 GRHL1Q9NZI5 618 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 IL1RAPL1Q9NZN1 696 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 NOCTQ9UK39 431 aaKnown RBP11.69□□□□□ -0.54
DDR1-240ENST00000454612 PTPRJQ12913 1337 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 RPTORQ8N122 1335 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 CFLARO15519 480 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 RPA3P35244 121 aaPredicted RBP11.69□□□□□ -0.54
DDR1-240ENST00000454612 SOX11P35716 441 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 COG7P83436 770 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 ITKQ08881 620 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 GEN1Q17RS7 908 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 SPOCD1Q6ZMY3 1216 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 ZCCHC23Q6ZST2 131 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 MAP7D3Q8IWC1 876 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 SLC10A4Q96EP9 437 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 RHBDL2Q9NX52 303 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 UBP1Q9NZI7 540 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 PHTF1Q9UMS5 762 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 OPHN1O60890 802 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 ENO1P06733 434 aaKnown RBP11.68□□□□□ -0.54
DDR1-240ENST00000454612 HOXA7P31268 230 aaPredicted RBP11.68□□□□□ -0.54
DDR1-240ENST00000454612 ALDH18A1P54886 795 aaKnown RBP11.68□□□□□ -0.54
DDR1-240ENST00000454612 SLC8A3P57103 927 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 CNGA2Q16280 664 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 SGSM1Q2NKQ1 1148 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 ARMCX6Q7L4S7 300 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 FAM131BQ86XD5 332 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 FUKQ8N0W3 1084 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 MORC4Q8TE76 937 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 GPRASP2Q96D09 838 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 HPDLQ96IR7 371 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 PAPOLBQ9NRJ5 636 aaKnown RBP11.68□□□□□ -0.54
DDR1-240ENST00000454612 STXBP5LQ9Y2K9 1186 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 GOLGA8TH3BQL2 631 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 MAPK13O15264 365 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 P4HA2O15460 535 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 USP12O75317 370 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 ANP32DO95626 131 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 ACAT1P24752 427 aaKnown RBP11.68□□□□□ -0.54
DDR1-240ENST00000454612 RASSF2P50749 326 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 RAD23BP54727 409 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 ARPP19P56211 112 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 ROR1Q01973 937 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 PLCB4Q15147 1175 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 C6orf163Q5TEZ5 329 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
DDR1-240ENST00000454612 FAM83AQ86UY5 434 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 RCOR2Q8IZ40 523 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 MCUQ8NE86 351 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 SCYL1Q96KG9 808 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 ASCC2Q9H1I8 757 aaPredicted RBP11.68□□□□□ -0.54
DDR1-240ENST00000454612 SCOCQ9UIL1 159 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 ARL2BPQ9Y2Y0 163 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 GRIN3BO60391 1043 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 NFICP08651 508 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 CA8P35219 290 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 PREPLQ4J6C6 727 aaPredicted RBP11.68□□□□□ -0.54
DDR1-240ENST00000454612 C1orf220Q5T0J3 134 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 ERMARDQ5T6L9 678 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 RWDD4Q6NW29 188 aaKnown RBP11.68□□□□□ -0.54
DDR1-240ENST00000454612 RAPH1Q70E73 1250 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 ENOSF1Q7L5Y1 443 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 SDCCAG8Q86SQ7 713 aaPredicted RBP11.68□□□□□ -0.54
DDR1-240ENST00000454612 MTDHQ86UE4 582 aaKnown RBP11.68□□□□□ -0.54
DDR1-240ENST00000454612 RASGEF1CQ8N431 466 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 ARL10Q8N8L6 244 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 DEPDC1BQ8WUY9 529 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 AFG1LQ8WV93 481 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 TRIM56Q9BRZ2 755 aaKnown RBP11.68□□□□□ -0.54
DDR1-240ENST00000454612 B3GNT5Q9BYG0 378 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 SNX25Q9H3E2 840 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 COMMD10Q9Y6G5 202 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 SCN9AQ15858 1988 aa11.68□□□□□ -0.54
DDR1-240ENST00000454612 GYG2O15488 501 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 FAM155BO75949 473 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 ANXA13P27216 316 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 ECHS1P30084 290 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 SLC1A1P43005 524 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 HSD17B4P51659 736 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 RSPH3Q86UC2 560 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 RXFP2Q8WXD0 754 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 TFAP2BQ92481 460 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 NUDCD1Q96RS6 583 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 PACSIN3Q9UKS6 424 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 LTBP3Q9NS15 1303 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 GOLGA8CPA6NN73 597 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 TRIM49D1C9J1S8 452 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 MED7O43513 233 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 INSRRP14616 1297 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 PTGIRP43119 386 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 YWHAEP62258 255 aaKnown RBP11.67□□□□□ -0.54
DDR1-240ENST00000454612 PTK7Q13308 1070 aa11.67□□□□□ -0.54
DDR1-240ENST00000454612 ZACNQ401N2 412 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms