RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 PCDHA5Q9Y5H7 936 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 HELZP42694 1942 aaKnown RBP10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 NCANO14594 1321 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 SLC38A8A6NNN8 435 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 HEPACAM2A8MVW5 462 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 A8MXQ7 604 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 TACC1O75410 805 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 FGF19O95750 216 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 STAU1O95793 577 aaKnown RBP10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 TRIM49P0CI25 452 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 TRIM49CP0CI26 452 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 CSH1P0DML2 217 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 CSH2P0DML3 217 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 KRT13P13646 458 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 HMGA1P17096 107 aaKnown RBP10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 AOC1P19801 751 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 CD72P21854 359 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 BDNFP23560 247 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 RPL13P26373 211 aaKnown RBP10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 CDC25CP30307 473 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 GDI1P31150 447 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 PSMC2P35998 433 aaKnown RBP10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 PIK3CAP42336 1068 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 RPL10AP62906 217 aaKnown RBP10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 MLF2Q15773 248 aaPredicted RBP10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 NFIL3Q16649 462 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 ZNF667Q5HYK9 610 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 C1orf220Q5T0J3 134 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 ZNF658Q5TYW1 1059 aaPredicted RBP10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 SPOPLQ6IQ16 392 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 C4orf50Q6ZRC1 276 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 SV2AQ7L0J3 742 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 ARID3BQ8IVW6 561 aaPredicted RBP10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 FAM186BQ8IYM0 893 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 RSPRY1Q96DX4 576 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 PCED1BQ96HM7 432 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 TIGD1Q96MW7 591 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 MKNK1Q9BUB5 465 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 TRMT61BQ9BVS5 477 aaKnown RBP10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 FOXQ1Q9C009 403 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 SMG9Q9H0W8 520 aaKnown RBP10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 SMYD3Q9H7B4 428 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 BRD9Q9H8M2 597 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 IL21Q9HBE4 155 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 ABCB6Q9NP58 842 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 HOOK1Q9UJC3 728 aaKnown RBP10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 ZDBF2Q9HCK1 2354 aa10.1□□□□□ -0.79
CDC42EP3-203ENST00000453555 WDFY4Q6ZS81 3184 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 MYO16Q9Y6X6 1858 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 H0Y858 1186 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 IKBKBO14920 756 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 MAPK13O15264 365 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 KINO60870 393 aaKnown RBP10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 RNF40O75150 1001 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 LRRN2O75325 713 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 HLA-DRAP01903 254 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 F11P03951 625 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 DCNP07585 359 aaKnown RBP10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 PSMC3P17980 439 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 PTPN1P18031 435 aaKnown RBP10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 GRIK1P39086 918 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 GCLMP48507 274 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 NLRP12P59046 1061 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 STARD6P59095 220 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 PFKPQ01813 784 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 NHLH1Q02575 133 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 PPP3CAQ08209 521 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 TCF15Q12870 199 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 MAPRE1Q15691 268 aaKnown RBP10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 SGSM1Q2NKQ1 1148 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 EDRF1Q3B7T1 1238 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 ZACNQ401N2 412 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 CFAP221Q4G0U5 840 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 ZCWPW2Q504Y3 356 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 ANKRD40Q6AI12 368 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 INTS8Q75QN2 995 aaKnown RBP10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 TMEM150AQ86TG1 271 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 MFSD6LQ8IWD5 586 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 YAF2Q8IY57 180 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 MAB21L3Q8N8X9 362 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 SPATA20Q8TB22 786 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 MYCBPAPQ8TBZ2 947 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 FUBP3Q96I24 572 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 SHDQ96IW2 340 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 PRRX2Q99811 253 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 TSG101Q99816 390 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 SLC46A2Q9BY10 475 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 SDCBP2Q9H190 292 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 TASP1Q9H6P5 420 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 TRPV4Q9HBA0 871 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 HEBP1Q9NRV9 189 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 FAM86C1Q9NVL1 165 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 CHMP5Q9NZZ3 219 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 SIT1Q9Y3P8 196 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 PATJQ8NI35 1801 aa10.09□□□□□ -0.79
CDC42EP3-203ENST00000453555 KANSL1LA0AUZ9 987 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 TRIM49BA6NDI0 452 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 CLDN5O00501 218 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 ZNF263O14978 683 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 CETN3O15182 167 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms