RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 NBL1P41271 181 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 SYKP43405 635 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 SOX9P48436 509 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 STK4Q13043 487 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 BIRC3Q13489 604 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 NFE2Q16621 373 aaPredicted RBP9.29□□□□□ -0.92
RFX3-209ENST00000451859 KNOP1Q1ED39 458 aaKnown RBP9.29□□□□□ -0.92
RFX3-209ENST00000451859 SOWAHAQ2M3V2 549 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 ZNF852Q6ZMS4 543 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 MFSD6LQ8IWD5 586 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 TOP6BLQ8N6T0 577 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 MAB21L3Q8N8X9 362 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 FSIP1Q8NA03 581 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 KIAA0895Q8NCT3 520 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 KBTBD7Q8WVZ9 684 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 MYLPFQ96A32 169 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 ELMO3Q96BJ8 720 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 SYT15Q9BQS2 421 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 ACBD6Q9BR61 282 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 DDX23Q9BUQ8 820 aaKnown RBP9.29□□□□□ -0.92
RFX3-209ENST00000451859 TASP1Q9H6P5 420 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 TRPC7Q9HCX4 862 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 GDAP2Q9NXN4 497 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 HSFX1Q9UBD0 423 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 MRPS17Q9Y2R5 130 aaKnown RBP9.29□□□□□ -0.92
RFX3-209ENST00000451859 EML5Q05BV3 1969 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 LAMTOR5O43504 91 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 FGF19O95750 216 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 CST3P01034 146 aaPredicted RBP9.28□□□□□ -0.92
RFX3-209ENST00000451859 RPN1P04843 607 aaKnown RBP9.28□□□□□ -0.92
RFX3-209ENST00000451859 SP9P0CG40 484 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 HMGA1P17096 107 aaKnown RBP9.28□□□□□ -0.92
RFX3-209ENST00000451859 BDNFP23560 247 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 CMA1P23946 247 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 CCNE1P24864 410 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 LHX1P48742 406 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 NDUFA8P51970 172 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 KPNA1P52294 538 aaPredicted RBP9.28□□□□□ -0.92
RFX3-209ENST00000451859 NLRP12P59046 1061 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 MYL6P60660 151 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 TNNC1P63316 161 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 CYP27A1Q02318 531 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 SMARCB1Q12824 385 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 TRPC3Q13507 836 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 PSMD6Q15008 389 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 BMT2Q1RMZ1 405 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 MDH1BQ5I0G3 518 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 CEP135Q66GS9 1140 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 TXNDC8Q6A555 127 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 TSSK4Q6SA08 328 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 SCARA5Q6ZMJ2 495 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 OR6B3Q8NGW1 331 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 PLEKHO2Q8TD55 490 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 FAM3CQ92520 227 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 MRPS31Q92665 395 aaKnown RBP9.28□□□□□ -0.92
RFX3-209ENST00000451859 E2F7Q96AV8 911 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 LRRC3BQ96PB8 259 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 PKMYT1Q99640 499 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 MRPL45Q9BRJ2 306 aaKnown RBP9.28□□□□□ -0.92
RFX3-209ENST00000451859 SLC46A2Q9BY10 475 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 SNX25Q9H3E2 840 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 TRPV4Q9HBA0 871 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 CRTAC1Q9NQ79 661 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 GTSE1Q9NYZ3 720 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 NXF1Q9UBU9 619 aaKnown RBP9.28□□□□□ -0.92
RFX3-209ENST00000451859 DACH1Q9UI36 760 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 MAPK8IP1Q9UQF2 711 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 EP300Q09472 2414 aaPredicted RBP9.28□□□□□ -0.92
RFX3-209ENST00000451859 DMXL1Q9Y485 3027 aa9.28□□□□□ -0.92
RFX3-209ENST00000451859 MYO18AQ92614 2054 aaKnown RBP9.27□□□□□ -0.93
RFX3-209ENST00000451859 SDK1Q7Z5N4 2213 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 SHISA7A6NL88 538 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 PROB1E7EW31 1015 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 MAN2B1O00754 1011 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 GABRDO14764 452 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 CHADO15335 359 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 NCAM2O15394 837 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 CSH1P0DML2 217 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 CSH2P0DML3 217 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 WARSP23381 471 aaKnown RBP9.27□□□□□ -0.93
RFX3-209ENST00000451859 AVPR1AP37288 418 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 RAP1GAPP47736 663 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 SNRPFP62306 86 aaKnown RBP9.27□□□□□ -0.93
RFX3-209ENST00000451859 RPL10AP62906 217 aaKnown RBP9.27□□□□□ -0.93
RFX3-209ENST00000451859 CSTF1Q05048 431 aaKnown RBP9.27□□□□□ -0.93
RFX3-209ENST00000451859 TNK2Q07912 1038 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 IFRD2Q12894 506 aaPredicted RBP9.27□□□□□ -0.93
RFX3-209ENST00000451859 MTAPQ13126 283 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 ZNF699Q32M78 642 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 WDR72Q3MJ13 1102 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 C4orf50Q6ZRC1 276 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 TMEM150AQ86TG1 271 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 C12orf56Q8IXR9 622 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 CMTM8Q8IZV2 173 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 BPIFB1Q8TDL5 484 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 CCDC47Q96A33 483 aaKnown RBP9.27□□□□□ -0.93
RFX3-209ENST00000451859 HINFPQ9BQA5 517 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 GZF1Q9H116 711 aaPredicted RBP9.27□□□□□ -0.93
RFX3-209ENST00000451859 GOLPH3LQ9H4A5 285 aa9.27□□□□□ -0.93
RFX3-209ENST00000451859 DPEP3Q9H4B8 488 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms