RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 FANCLQ9NW38 375 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 IGSF9Q9P2J2 1179 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 FAM8A1Q9UBU6 413 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 C9IYK1 514 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 DFFAO00273 331 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 ITGB1P05556 798 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 ARL2P36404 184 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 TNFSF9P41273 254 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 PLA2G4AP47712 749 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 PSEN1P49768 467 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 COPB1P53618 953 aaKnown RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 CYP4F8P98187 520 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 FANCCQ00597 558 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 TFF2Q03403 129 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 ARMCX6Q7L4S7 300 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 FBXL16Q8N461 479 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 LRRC52Q8N7C0 313 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 ARL14EPQ8N8R7 260 aaPredicted RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 PHF7Q9BWX1 381 aaPredicted RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 PLK2Q9NYY3 685 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 USP15Q9Y4E8 981 aaPredicted RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 CNOT1A5YKK6 2376 aaKnown RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 TNRC6CQ9HCJ0 1690 aaKnown RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 FAM170BA6NMN3 283 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 M0QYT0 321 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 IL1BP01584 269 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 CNPP09543 421 aaKnown RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 CYP2F1P24903 491 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 GTF2H1P32780 548 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 ROR1Q01973 937 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 POU5F1BQ06416 359 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 GTF2H3Q13889 308 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 PPP1R7Q15435 360 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 EDRF1Q3B7T1 1238 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 ITPRIPL2Q3MIP1 535 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 NUGGCQ68CJ6 796 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 SHC4Q6S5L8 630 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 BZW1Q7L1Q6 419 aaKnown RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 TMX1Q9H3N1 280 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 VAV3Q9UKW4 847 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 GUCA1BQ9UMX6 200 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 KAT6AQ92794 2004 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 POLR2AP24928 1970 aaKnown RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 H3BNC9 293 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 CBX4O00257 560 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 ZNF623O75123 536 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 SETSIPP0DME0 302 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 FMO5P49326 533 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 USP4Q13107 963 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 TDGQ13569 410 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 KLHL40Q2TBA0 621 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 C9orf57Q5W0N0 161 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 ARMC6Q6NXE6 501 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 SV2AQ7L0J3 742 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 CELF5Q8N6W0 485 aaKnown RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 MRPL43Q8N983 215 aaKnown RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 ATP11CQ8NB49 1132 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 SETD7Q8WTS6 366 aaKnown RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 TMEM176AQ96HP8 235 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 C1QTNF7Q9BXJ2 289 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 GOLGA4Q13439 2230 aaKnown RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 ANKRD63C9JTQ0 380 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 SLC16A3O15427 465 aaKnown RBP8.87□□□□□ -0.99
HCG18-238ENST00000449544 CYP26A1O43174 497 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 F9P00740 461 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 RHOP08100 348 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 KRT3P12035 628 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 BRD2P25440 801 aaKnown RBP8.87□□□□□ -0.99
HCG18-238ENST00000449544 SERPINB6P35237 376 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 SARNPP82979 210 aaKnown RBP8.87□□□□□ -0.99
HCG18-238ENST00000449544 BST2Q10589 180 aaKnown RBP8.87□□□□□ -0.99
HCG18-238ENST00000449544 CUL2Q13617 745 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 DRAP1Q14919 205 aaPredicted RBP8.87□□□□□ -0.99
HCG18-238ENST00000449544 LRIT3Q3SXY7 679 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 TRIM72Q6ZMU5 477 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 CCDC33Q8N5R6 958 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 DNAAF3Q8N9W5 541 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 PIGKQ92643 395 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 KCNB2Q92953 911 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 TBC1D31Q96DN5 1066 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 DDX23Q9BUQ8 820 aaKnown RBP8.87□□□□□ -0.99
HCG18-238ENST00000449544 CISHQ9NSE2 258 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 TBC1D3DA0A087WVF3 549 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 TBC1D3IA0A087WXS9 549 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 TBC1D3EA0A087X179 549 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 TBC1D3KA0A087X1G2 549 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 TBC1D3FA6NER0 549 aaPredicted RBP8.87□□□□□ -0.99
HCG18-238ENST00000449544 TBC1D3LB9A6J9 549 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 C1QTNF3-AMACRE9PGA6 284 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 H3BRJ5 948 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 AGRPO00253 132 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 RGS20O76081 388 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 RHOBTB3O94955 611 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 EPHX1P07099 455 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 TBC1D3HP0C7X1 549 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 RARGP13631 454 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 PPARGP37231 505 aaPredicted RBP8.87□□□□□ -0.99
HCG18-238ENST00000449544 DYNLT1P63172 113 aa8.87□□□□□ -0.99
HCG18-238ENST00000449544 HLTFQ14527 1009 aaKnown RBP eCLIP8.87□□□□□ -0.998e-7■■□□□ 11.9
HCG18-238ENST00000449544 C10orf76Q5T2E6 689 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms