RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 BST2Q10589 180 aaKnown RBP26.26■■□□□ 1.79
RFFL-206ENST00000447669 BTG3Q14201 252 aaPredicted RBP26.26■■□□□ 1.79
RFFL-206ENST00000447669 VARS2Q5ST30 1063 aaKnown RBP26.26■■□□□ 1.79
RFFL-206ENST00000447669 PAPD7Q5XG87 772 aaKnown RBP26.26■■□□□ 1.79
RFFL-206ENST00000447669 PEX26Q7Z412 305 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 CLEC4CQ8WTT0 213 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 TMEM175Q9BSA9 504 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 ABCB6Q9NP58 842 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 KRT82Q9NSB4 513 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 RNF216Q9NWF9 866 aaPredicted RBP26.26■■□□□ 1.79
RFFL-206ENST00000447669 MRPL42Q9Y6G3 142 aaKnown RBP26.26■■□□□ 1.79
RFFL-206ENST00000447669 TRAPPC3O43617 180 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 BCAT1P54687 386 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 HADHBP55084 474 aaKnown RBP26.26■■□□□ 1.79
RFFL-206ENST00000447669 RTP2Q5QGT7 225 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 DNAJC24Q6P3W2 148 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 THEM5Q8N1Q8 247 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 JOSD2Q8TAC2 188 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 COG1Q8WTW3 980 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 PKMYT1Q99640 499 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 VN1R3Q9BXE9 311 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 MIS12Q9H081 205 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 PARVAQ9NVD7 372 aa26.26■■□□□ 1.79
RFFL-206ENST00000447669 GRAP2O75791 330 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 BAIAP3O94812 1187 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 COMTP21964 271 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 OGDHQ02218 1023 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 TAF5Q15542 800 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 FAM171BQ6P995 826 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 CLEC20AQ6ZU45 233 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 FAM183BPQ6ZVS7 135 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 FAM35AQ86V20 835 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 EMC1Q8N766 993 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 NDRG1Q92597 394 aaKnown RBP26.25■■□□□ 1.79
RFFL-206ENST00000447669 CAPZA3Q96KX2 299 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 YME1L1Q96TA2 773 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 DUSP16Q9BY84 665 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 MRFAP1Q9Y605 127 aa26.25■■□□□ 1.79
RFFL-206ENST00000447669 LCP1P13796 627 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 BDNFP23560 247 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 GABRB2P47870 512 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 RNASE9P60153 205 aaKnown RBP26.24■■□□□ 1.79
RFFL-206ENST00000447669 OR6B2Q6IFH4 312 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 FEZF2Q8TBJ5 459 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 SMOQ99835 787 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 SLC4A5Q9BY07 1137 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 METTL5Q9NRN9 209 aaKnown RBP26.24■■□□□ 1.79
RFFL-206ENST00000447669 NLRC5Q86WI3 1866 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 AP1G2O75843 785 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 OAZ2O95190 189 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 PPP1R15BQ5SWA1 713 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 KCNT2Q6UVM3 1135 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 RSPO2Q6UXX9 243 aaPredicted RBP26.24■■□□□ 1.79
RFFL-206ENST00000447669 PIGZQ86VD9 579 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 C3orf20Q8ND61 904 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 SMARCAL1Q9NZC9 954 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 EHD2Q9NZN4 543 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 SNX12Q9UMY4 172 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 SAR1BQ9Y6B6 198 aa26.24■■□□□ 1.79
RFFL-206ENST00000447669 SF3B1O75533 1304 aaKnown RBP eCLIP26.23■■□□□ 1.795e-6■■■■■ 88.1
RFFL-206ENST00000447669 NPR3P17342 541 aa26.23■■□□□ 1.79
RFFL-206ENST00000447669 PAX3P23760 479 aa26.23■■□□□ 1.79
RFFL-206ENST00000447669 RFC1P35251 1148 aaPredicted RBP26.23■■□□□ 1.79
RFFL-206ENST00000447669 PLCB3Q01970 1234 aa26.23■■□□□ 1.79
RFFL-206ENST00000447669 PPP1R2P3Q6NXS1 205 aa26.23■■□□□ 1.79
RFFL-206ENST00000447669 PRSS55Q6UWB4 352 aaPredicted RBP26.23■■□□□ 1.79
RFFL-206ENST00000447669 ZMIZ2Q8NF64 920 aa26.23■■□□□ 1.79
RFFL-206ENST00000447669 DPF3Q92784 378 aa26.23■■□□□ 1.79
RFFL-206ENST00000447669 SELENOOQ9BVL4 669 aa26.23■■□□□ 1.79
RFFL-206ENST00000447669 L2HGDHQ9H9P8 463 aa26.23■■□□□ 1.79
RFFL-206ENST00000447669 MRPL47Q9HD33 250 aaKnown RBP26.23■■□□□ 1.79
RFFL-206ENST00000447669 EFCAB14O75071 495 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 FGFR3P22607 806 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 MARCKSL1P49006 195 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 ZNF252P-AS1Q0IIN9 211 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 SLC39A12Q504Y0 691 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 FAM102AQ5T9C2 384 aaPredicted RBP26.22■■□□□ 1.79
RFFL-206ENST00000447669 DCUN1D2Q6PH85 259 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 OSBPL9Q96SU4 736 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 AMFRQ9UKV5 643 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 SCINQ9Y6U3 715 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 TMEM191CA6NGB0 347 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 MYO1FO00160 1098 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 PAPSS1O43252 624 aaPredicted RBP26.22■■□□□ 1.79
RFFL-206ENST00000447669 FAM200BP0CF97 657 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 KRT3P12035 628 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 NDUFV1P49821 464 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 ARPP19P56211 112 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 CTXN3Q4LDR2 81 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 GPRIN1Q7Z2K8 1008 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 TMEM110Q86TL2 294 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 SYCE1Q8N0S2 351 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 IPO4Q8TEX9 1081 aaKnown RBP26.22■■□□□ 1.79
RFFL-206ENST00000447669 KRT35Q92764 455 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 MCRS1Q96EZ8 462 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 IGSF21Q96ID5 467 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 PGLYRP2Q96PD5 576 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 DNAI2Q9GZS0 605 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 STRIP2Q9ULQ0 834 aa26.22■■□□□ 1.79
RFFL-206ENST00000447669 CEP290O15078 2479 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms