RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 FAM26EQ8N5C1 309 aa15.46■□□□□ 0.07
SYNCRIP-203ENST00000444272 ETNPPLQ8TBG4 499 aa15.46■□□□□ 0.07
SYNCRIP-203ENST00000444272 C18orf25Q96B23 403 aaPredicted RBP15.46■□□□□ 0.07
SYNCRIP-203ENST00000444272 TMEM87BQ96K49 555 aa15.46■□□□□ 0.07
SYNCRIP-203ENST00000444272 ZNF578Q96N58 590 aaPredicted RBP15.46■□□□□ 0.07
SYNCRIP-203ENST00000444272 ZMAT2Q96NC0 199 aaKnown RBP15.46■□□□□ 0.07
SYNCRIP-203ENST00000444272 MTA3Q9BTC8 594 aa15.46■□□□□ 0.07
SYNCRIP-203ENST00000444272 POLR3FQ9H1D9 316 aaPredicted RBP15.46■□□□□ 0.07
SYNCRIP-203ENST00000444272 SLKQ9H2G2 1235 aaPredicted RBP15.46■□□□□ 0.07
SYNCRIP-203ENST00000444272 GPRC5CQ9NQ84 441 aa15.46■□□□□ 0.07
SYNCRIP-203ENST00000444272 RBM28Q9NW13 759 aaKnown RBP15.46■□□□□ 0.07
SYNCRIP-203ENST00000444272 KCNK3O14649 394 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 ZBTB24O43167 697 aaPredicted RBP15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 PCDHGA12O60330 932 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 NCAM1P13591 858 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 LIG1P18858 919 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 RPL9P32969 192 aaKnown RBP15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 LIFRP42702 1097 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 WASP42768 502 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 CCT8P50990 548 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 IL9RQ01113 521 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 KIF19Q2TAC6 998 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 INAVAQ3KP66 663 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 ZBTB8OSQ8IWT0 167 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 TRPC7Q9HCX4 862 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 ARHGEF4Q9NR80 690 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 NFE2L3Q9Y4A8 694 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 SNX11Q9Y5W9 270 aa15.45■□□□□ 0.06
SYNCRIP-203ENST00000444272 BTBD18B2RXH4 712 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 CKMP06732 381 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 C1SP09871 688 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 GLDCP23378 1020 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 TUFMP49411 452 aaKnown RBP15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 CSNK1EP49674 416 aaKnown RBP15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 INF2Q27J81 1249 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 DCAF12L1Q5VU92 463 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 CDCA2Q69YH5 1023 aaPredicted RBP15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 USP37Q86T82 979 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 C12orf40Q86WS4 652 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 CEP120Q8N960 986 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 SH3RF2Q8TEC5 729 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 SLC22A12Q96S37 553 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 CYP2S1Q96SQ9 504 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 GPR174Q9BXC1 333 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 LRRC2Q9BYS8 371 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 DPH1Q9BZG8 443 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 SLC6A17Q9H1V8 727 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 RGL1Q9NZL6 768 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 HSFX1Q9UBD0 423 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 PLEKHB1Q9UF11 243 aaPredicted RBP15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 CRYBG3Q68DQ2 2970 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 CELSR2Q9HCU4 2923 aa15.44■□□□□ 0.06
SYNCRIP-203ENST00000444272 A0A1W2PQF6 199 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 M0QZQ0 153 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 DGAT1O75907 488 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 CYP17A1P05093 508 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 ITGB6P18564 788 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 GNA11P29992 359 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 CD6P30203 668 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 MCM5P33992 734 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 TNFSF9P41273 254 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 TNFRSF4P43489 277 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 ACADVLP49748 655 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 YARSP54577 528 aaKnown RBP15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 OSTNP61366 133 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 DMP1Q13316 513 aaPredicted RBP15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 MYBPC2Q14324 1141 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 PFKFB3Q16875 520 aaPredicted RBP15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 XKR4Q5GH76 650 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 PPP4R3AQ6IN85 833 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 ALKAL1Q6UXT8 129 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 TRMT11Q7Z4G4 463 aaKnown RBP15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 STKLD1Q8NE28 680 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 CNDP2Q96KP4 475 aaKnown RBP15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 TOPORSQ9NS56 1045 aaPredicted RBP15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 EIF2B4Q9UI10 523 aaKnown RBP15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 VAV3Q9UKW4 847 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 CLCA2Q9UQC9 943 aa15.43■□□□□ 0.06
SYNCRIP-203ENST00000444272 NF1P21359 2839 aa15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 A0A0A0MRY4 1105 aa15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 E2F8A0AVK6 867 aa15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 USP17L7P0C7H9 530 aa15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 HMGA1P17096 107 aaKnown RBP15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 ELAVL4P26378 380 aaKnown RBP15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 HSPA4P34932 840 aa15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 GRIA2P42262 883 aa15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 RESTQ13127 1097 aa15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 PPP2R5CQ13362 524 aa15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 CTTNQ14247 550 aaKnown RBP15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 RTN1Q16799 776 aa15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 LINC00303Q3SY05 128 aa15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 ZC2HC1CQ53FD0 456 aaPredicted RBP15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 IPO4Q8TEX9 1081 aaKnown RBP15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 CCDC12Q8WUD4 166 aaPredicted RBP15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 TOE1Q96GM8 510 aaKnown RBP15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 DYDC2Q96IM9 177 aa15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 MAGED2Q9UNF1 606 aaPredicted RBP15.42■□□□□ 0.06
SYNCRIP-203ENST00000444272 NBASA2RRP1 2371 aa15.41■□□□□ 0.06
SYNCRIP-203ENST00000444272 MYOFQ9NZM1 2061 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms