RNA–Protein interactions for RNA: ENST00000440001.2

TRAF3IP2-AS1-203, TRAF3IP2 antisense RNA 1, humanhuman

TSL 1 (best)

Gene TRAF3IP2-AS1, Length 915 nt, Biotype antisense RNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-AS1-203ENST00000440001 SATB1Q01826 763 aa29.38■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 MAPRE1Q15691 268 aaKnown RBP29.38■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 VSTM1Q6UX27 236 aa29.38■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 Q6ZS52 159 aa29.38■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 DCLK2Q8N568 766 aa29.38■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 PCED1BQ96HM7 432 aa29.38■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 XYLT2Q9H1B5 865 aa29.38■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 EPC1Q9H2F5 836 aa29.38■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 STAU1O95793 577 aaKnown RBP29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 FAM163BP0C2L3 166 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 BDNFP23560 247 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 CCINQ13939 588 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 WDR72Q3MJ13 1102 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 KMT5BQ4FZB7 885 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 DGKKQ5KSL6 1271 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 TRIM68Q6AZZ1 485 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 SPEM1Q8N4L4 309 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 MYCBPAPQ8TBZ2 947 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 CHFRQ96EP1 664 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 SPATA17Q96L03 361 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 SLC22A12Q96S37 553 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 EXOC1Q9NV70 894 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 DCHS1Q96JQ0 3298 aa29.37■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 WDR87Q6ZQQ6 2873 aa29.36■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 OTOL1A6NHN0 477 aaPredicted RBP29.36■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 GNL1P36915 607 aaPredicted RBP29.36■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 CXCL12P48061 93 aa29.36■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 MYL6P60660 151 aa29.36■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 RUNX3Q13761 415 aa29.36■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 PPP2R5DQ14738 602 aa29.36■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 GOLGA5Q8TBA6 731 aa29.36■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 HINFPQ9BQA5 517 aa29.36■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 EBF3Q9H4W6 596 aa29.36■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 DMAC2Q9NW81 257 aa29.36■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 USP25Q9UHP3 1055 aa29.36■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 TNNC1P63316 161 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 CYP27A1Q02318 531 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 FAM160A1Q05DH4 1040 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 PSMD2Q13200 908 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 KIAA2013Q8IYS2 634 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 PARD3BQ8TEW8 1205 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 TMEM174Q8WUU8 243 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 SPATA32Q96LK8 384 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 CEP295NLQ96MC4 621 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 CYP2S1Q96SQ9 504 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 SNX25Q9H3E2 840 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 KCTD10Q9H3F6 313 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 TRPC7Q9HCX4 862 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 GCNT4Q9P109 453 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 SMG5Q9UPR3 1016 aaKnown RBP29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 ATG2BQ96BY7 2078 aa29.35■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 ATICP31939 592 aa29.34■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 GRIK1P39086 918 aa29.34■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 NRLP54845 237 aa29.34■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 CLDN10P78369 228 aa29.34■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 KRT85P78386 507 aa29.34■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 TRPC3Q13507 836 aa29.34■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 ZNF77Q15935 545 aa29.34■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 MDH1BQ5I0G3 518 aa29.34■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 TDRD10Q5VZ19 366 aaKnown RBP29.34■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 SLC9A9Q8IVB4 645 aa29.34■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 OR6B3Q8NGW1 331 aa29.34■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 DPEP3Q9H4B8 488 aa29.34■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 C2orf42Q9NWW7 574 aa29.34■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 TRAV19A0A0A6YYK7 116 aa29.33■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 C2orf78A6NCI8 922 aa29.33■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 LRRIQ3A6PVS8 624 aaPredicted RBP29.33■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 PAPSS2O95340 614 aaPredicted RBP29.33■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 ARSAP15289 507 aa29.33■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 USP46P62068 366 aa29.33■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 USP4Q13107 963 aa29.33■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 SYAP1Q96A49 352 aaPredicted RBP29.33■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 VRTNQ9H8Y1 702 aa29.33■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 NXF1Q9UBU9 619 aaKnown RBP29.33■■■□□ 2.29
TRAF3IP2-AS1-203ENST00000440001 FAM237AA0A1B0GTK4 181 aa29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 MYL1P05976 194 aa29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 USP17L7P0C7H9 530 aa29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 PTPN1P18031 435 aaKnown RBP29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 ID4P47928 161 aa29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 MTF1Q14872 753 aa29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 CC2D1AQ6P1N0 951 aaPredicted RBP29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 DENND5BQ6ZUT9 1274 aa29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 SYNPOQ8N3V7 929 aa29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 ARL14EPQ8N8R7 260 aaPredicted RBP29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 FSIP1Q8NA03 581 aa29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 TTLL2Q9BWV7 592 aa29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 TMEM30AQ9NV96 361 aa29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 FRYLO94915 3013 aa29.32■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 K7ESF4 209 aa29.31■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 TRIM66O15016 1216 aa29.31■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 PHACTR2O75167 634 aa29.31■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 C4BPAP04003 597 aaKnown RBP29.31■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 CKMP06732 381 aa29.31■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 DMWDQ09019 674 aa29.31■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 TMEM196Q5HYL7 178 aa29.31■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 C8orf48Q96LL4 319 aa29.31■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 F8VP50 259 aa29.3■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 PDXKO00764 312 aa29.3■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 VNN1O95497 513 aa29.3■■■□□ 2.28
TRAF3IP2-AS1-203ENST00000440001 PRR29P0C7W0 189 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms