RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 OCM2P0CE71 109 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 OCMP0CE72 109 aaPredicted RBP16.51■□□□□ 0.23
DHFR-201ENST00000439211 CLNKQ7Z7G1 428 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 MCF2L2Q86YR7 1114 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 KBTBD2Q8IY47 623 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 DEPTORQ8TB45 409 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 GTF3C4Q9UKN8 822 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 ADCY6O43306 1168 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 PSMC1P62191 440 aaKnown RBP16.5■□□□□ 0.23
DHFR-201ENST00000439211 PLOD1Q02809 727 aaPredicted RBP16.5■□□□□ 0.23
DHFR-201ENST00000439211 RRP1BQ14684 758 aaKnown RBP16.5■□□□□ 0.23
DHFR-201ENST00000439211 MTERF2Q49AM1 385 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 SLC45A4Q5BKX6 768 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 DACT2Q5SW24 774 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 LLGL2Q6P1M3 1020 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 ZC3H3Q8IXZ2 948 aaKnown RBP16.5■□□□□ 0.23
DHFR-201ENST00000439211 RSPH1Q8WYR4 309 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 IDI2Q9BXS1 227 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 PAIP1Q9H074 479 aaKnown RBP16.5■□□□□ 0.23
DHFR-201ENST00000439211 HEY1Q9Y5J3 304 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 RALAP11233 206 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 RRM1P23921 792 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 CHN2P52757 468 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 MAP3K21Q5TCX8 1036 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 C11orf63Q6NUN7 778 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 KLHL35Q6PF15 583 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 PYDC1Q8WXC3 89 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 RIT2Q99578 217 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 GLIS2Q9BZE0 524 aaPredicted RBP16.5■□□□□ 0.23
DHFR-201ENST00000439211 KRT82Q9NSB4 513 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 UVRAGQ9P2Y5 699 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 HERC5Q9UII4 1024 aaKnown RBP16.5■□□□□ 0.23
DHFR-201ENST00000439211 PHLPP1O60346 1717 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 CBFA2T3O75081 653 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 CD97P48960 835 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 ACOT2P49753 483 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 IZUMO3Q5VZ72 239 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 DDHD1Q8NEL9 900 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 CNBD2Q96M20 576 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 GCNAQ96QF7 691 aa16.5■□□□□ 0.23
DHFR-201ENST00000439211 PRPF18Q99633 342 aaKnown RBP16.5■□□□□ 0.23
DHFR-201ENST00000439211 A8MXQ7 604 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 PORP16435 677 aaPredicted RBP16.49■□□□□ 0.23
DHFR-201ENST00000439211 ITGB5P18084 799 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 MPP2Q14168 576 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 CNGA3Q16281 694 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 ACAD11Q709F0 780 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 THAP11Q96EK4 314 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 GABBR1Q9UBS5 961 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 UBE4BO95155 1302 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 ZMYM2Q9UBW7 1377 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 HMGB2P26583 209 aaKnown RBP16.49■□□□□ 0.23
DHFR-201ENST00000439211 LVRNQ6Q4G3 990 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 PRUNE1Q86TP1 453 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 CCDC89Q8N998 374 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 IL31RAQ8NI17 732 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 PALMDQ9NP74 551 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 ZDHHC18Q9NUE0 388 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 IKBKGQ9Y6K9 419 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 SPATA31A6Q5VVP1 1343 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 IQCA1LA6NCM1 817 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 XPO1O14980 1071 aaKnown RBP16.49■□□□□ 0.23
DHFR-201ENST00000439211 ENTPD3O75355 529 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 TRMUO75648 421 aaKnown RBP16.49■□□□□ 0.23
DHFR-201ENST00000439211 GSTT2P0CG29 244 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 GSTT2BP0CG30 244 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 CD19P15391 556 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 TATDN1Q6P1N9 297 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 OSBPL8Q9BZF1 889 aa16.49■□□□□ 0.23
DHFR-201ENST00000439211 GOLGB1Q14789 3259 aaKnown RBP16.48■□□□□ 0.23
DHFR-201ENST00000439211 SGK1O00141 431 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 ADRB2P07550 413 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 HIRAP54198 1017 aaPredicted RBP16.48■□□□□ 0.23
DHFR-201ENST00000439211 SULT2A1Q06520 285 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 LPCAT4Q643R3 524 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 KLHDC10Q6PID8 442 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 ZDHHC24Q6UX98 284 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 TMX2Q9Y320 296 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 MROH7Q68CQ1 1323 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 WDR64B1ANS9 1081 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 GZMAP12544 262 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 PSMC5P62195 406 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 MFSD5Q6N075 450 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 TMEM214Q6NUQ4 689 aaKnown RBP16.48■□□□□ 0.23
DHFR-201ENST00000439211 PPP1R2P3Q6NXS1 205 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 RIPOR1Q6ZS17 1223 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 SV2AQ7L0J3 742 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 CYP4F11Q9HBI6 524 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 FBXO6Q9NRD1 293 aaPredicted RBP16.48■□□□□ 0.23
DHFR-201ENST00000439211 FEM1BQ9UK73 627 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 MYH1P12882 1939 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 GOLGA8RI6L899 631 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 MATN2O00339 956 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 ITIH2P19823 946 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 MAN1A1P33908 653 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 TMCO4Q5TGY1 634 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 SWSAP1Q6NVH7 229 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 TAAR1Q96RJ0 339 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 DCUN1D5Q9BTE7 237 aa16.48■□□□□ 0.23
DHFR-201ENST00000439211 RRN3Q9NYV6 651 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms