RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PCDHAC2Q9Y5I4 1007 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 SNX9Q9Y5X1 595 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 PPP1R12AO14974 1030 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 SKAP2O75563 359 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 ELK3P41970 407 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 MAMLD1Q13495 774 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 TBCCQ15814 346 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 SHROOM1Q2M3G4 852 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 SLC45A4Q5BKX6 768 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 JADE1Q6IE81 842 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 KCNV1Q6PIU1 500 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 RAB44Q7Z6P3 723 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 WDR49Q8IV35 697 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 AGBL3Q8NEM8 1001 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 PIK3R5Q8WYR1 880 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 MBOAT7Q96N66 472 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 SUDS3Q9H7L9 328 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 SAR1AQ9NR31 198 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 AJAP1Q9UKB5 411 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 NOD1Q9Y239 953 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 LOC100653049A0A140TA62 436 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 MAGEA13PA6NCF6 341 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 C5orf60A6NFR6 353 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 E7ENQ6 273 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 F8VP50 259 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 KRT34O76011 436 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 MAP3K6O95382 1288 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 UBTFL6P0CB48 400 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 HSPA8P11142 646 aaKnown RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 RPA3P35244 121 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 HADHBP55084 474 aaKnown RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 MRPS9P82933 396 aaKnown RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 RIPK1Q13546 671 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 KPNB1Q14974 876 aaKnown RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 PDK4Q16654 411 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 KLC3Q6P597 504 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 MTHFD1LQ6UB35 978 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 APOBEC3FQ8IUX4 373 aaKnown RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 MAGEC3Q8TD91 643 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 PRPF31Q8WWY3 499 aaKnown RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 MYOZ2Q9NPC6 264 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 PRMT7Q9NVM4 692 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 DMAC2Q9NW81 257 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 GTSE1Q9NYZ3 720 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 USP18Q9UMW8 372 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 AFG3L2Q9Y4W6 797 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 SPATA31A6Q5VVP1 1343 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 LIASO43766 372 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 ATP9BO43861 1147 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 GAS2O43903 313 aaKnown RBP6.96□□□□□ -1.29
CSDE1-205ENST00000438362 RASSF9O75901 435 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 KRT16P08779 473 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 LCP1P13796 627 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 TAC1P20366 129 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 PAX7P23759 505 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 SKIV2L2P42285 1042 aaKnown RBP6.96□□□□□ -1.29
CSDE1-205ENST00000438362 PTGIRP43119 386 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 OCRLQ01968 901 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 SNX30Q5VWJ9 437 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 ITPRIPL1Q6GPH6 555 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 FAM83AQ86UY5 434 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 SCUBE1Q8IWY4 988 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 SEMA4DQ92854 862 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 CCDC97Q96F63 343 aaPredicted RBP6.96□□□□□ -1.29
CSDE1-205ENST00000438362 HPDLQ96IR7 371 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 BTBD10Q9BSF8 475 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 CNPY3Q9BT09 278 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 MRPL40Q9NQ50 206 aaKnown RBP6.96□□□□□ -1.29
CSDE1-205ENST00000438362 FAM49BQ9NUQ9 324 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 GRHL1Q9NZI5 618 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 ADA2Q9NZK5 511 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 PDP2Q9P2J9 529 aa6.96□□□□□ -1.29
CSDE1-205ENST00000438362 BAZ2AQ9UIF9 1905 aaKnown RBP6.96□□□□□ -1.3
CSDE1-205ENST00000438362 FCHO1O14526 889 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 ITGB3P05106 788 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 TXNP10599 105 aaKnown RBP6.96□□□□□ -1.3
CSDE1-205ENST00000438362 IREB2P48200 963 aaKnown RBP6.96□□□□□ -1.3
CSDE1-205ENST00000438362 COPAP53621 1224 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 AQP5P55064 265 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 NME3Q13232 169 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 ORC1Q13415 861 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 ATP13A4Q4VNC1 1196 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 LRRC38Q5VT99 294 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 RWDD4Q6NW29 188 aaKnown RBP6.96□□□□□ -1.3
CSDE1-205ENST00000438362 ZBTB45Q96K62 511 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-205ENST00000438362 AGAP3Q96P47 875 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 TBC1D10AQ9BXI6 508 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 SMARCAD1Q9H4L7 1026 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 SLCO1B3Q9NPD5 702 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 DRG1Q9Y295 367 aaKnown RBP6.96□□□□□ -1.3
CSDE1-205ENST00000438362 UBIAD1Q9Y5Z9 338 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 MYH6P13533 1939 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 PAMP19021 973 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 SERPINB3P29508 390 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 SPRP35270 261 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-205ENST00000438362 PDK2Q15119 407 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 CNGA3Q16281 694 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 ZACNQ401N2 412 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 POTEAQ6S8J7 498 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 391 ms