RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 CLDN10P78369 228 aa18.73■□□□□ 0.59
SBDSP1-203ENST00000437201 USP13Q92995 863 aaPredicted RBP18.73■□□□□ 0.59
SBDSP1-203ENST00000437201 EXOC4Q96A65 974 aa18.73■□□□□ 0.59
SBDSP1-203ENST00000437201 ZFYVE19Q96K21 471 aa18.73■□□□□ 0.59
SBDSP1-203ENST00000437201 MRPL45Q9BRJ2 306 aaKnown RBP18.73■□□□□ 0.59
SBDSP1-203ENST00000437201 KCTD10Q9H3F6 313 aa18.73■□□□□ 0.59
SBDSP1-203ENST00000437201 VRTNQ9H8Y1 702 aa18.73■□□□□ 0.59
SBDSP1-203ENST00000437201 CRTAC1Q9NQ79 661 aa18.73■□□□□ 0.59
SBDSP1-203ENST00000437201 PRMT8Q9NR22 394 aaPredicted RBP18.73■□□□□ 0.59
SBDSP1-203ENST00000437201 GKN1Q9NS71 199 aa18.73■□□□□ 0.59
SBDSP1-203ENST00000437201 GTSE1Q9NYZ3 720 aa18.73■□□□□ 0.59
SBDSP1-203ENST00000437201 NXF1Q9UBU9 619 aaKnown RBP18.73■□□□□ 0.59
SBDSP1-203ENST00000437201 COL4A3Q01955 1670 aa18.73■□□□□ 0.59
SBDSP1-203ENST00000437201 NUP210Q8TEM1 1887 aaPredicted RBP18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 HCRTO43612 131 aa18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 NR3C1P04150 777 aa18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 P4HA1P13674 534 aa18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 PFKLP17858 780 aa18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 PTPN1P18031 435 aaKnown RBP18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 PPP3CCP48454 512 aa18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 ZNF667Q5HYK9 610 aa18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 DENND5BQ6ZUT9 1274 aa18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 SYNPOQ8N3V7 929 aa18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 TMC2Q8TDI7 906 aa18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 PCED1BQ96HM7 432 aa18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 SMG9Q9H0W8 520 aaKnown RBP18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 TRPC7Q9HCX4 862 aa18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 MYO15AQ9UKN7 3530 aa18.72■□□□□ 0.59
SBDSP1-203ENST00000437201 TICRRQ7Z2Z1 1910 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 A8MXQ7 604 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 IKBKBO14920 756 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 RHOBTB3O94955 611 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 CXCL12P48061 93 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 CASP4P49662 377 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 FAM160A1Q05DH4 1040 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 RUNX3Q13761 415 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 NCOA4Q13772 614 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 PDGFRLQ15198 375 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 SGSM1Q2NKQ1 1148 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 ZNF699Q32M78 642 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 MDH1BQ5I0G3 518 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 TDRD10Q5VZ19 366 aaKnown RBP18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 KRBA2Q6ZNG9 492 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 SPEM1Q8N4L4 309 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 ZBTB44Q8NCP5 570 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 C8orf48Q96LL4 319 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 FAM83CQ9BQN1 747 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 ELOVL4Q9GZR5 314 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 GZF1Q9H116 711 aaPredicted RBP18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 XYLT2Q9H1B5 865 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 TRAF3IP3Q9Y228 551 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 ATP8B3O60423 1300 aa18.71■□□□□ 0.59
SBDSP1-203ENST00000437201 LRRIQ3A6PVS8 624 aaPredicted RBP18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 MAPK13O15264 365 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 C4BPAP04003 597 aaKnown RBP18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 CKMP06732 381 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 COL4A2P08572 1712 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 TRIM21P19474 475 aaKnown RBP18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 RPL13P26373 211 aaKnown RBP18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 SOX9P48436 509 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 NOP14P78316 857 aaKnown RBP18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 TNK2Q07912 1038 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 KCNB1Q14721 858 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 CCDC142Q17RM4 750 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 CEP135Q66GS9 1140 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 B3GALNT2Q8NCR0 500 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 STKLD1Q8NE28 680 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 TTC8Q8TAM2 541 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 RUBCNQ92622 972 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 TAF4BQ92750 862 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 NELL1Q92832 810 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 TNIP3Q96KP6 325 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 HINFPQ9BQA5 517 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 TRPM5Q9NZQ8 1165 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 CCL26Q9Y258 94 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 F5P12259 2224 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 CACNA1IQ9P0X4 2223 aa18.7■□□□□ 0.58
SBDSP1-203ENST00000437201 TADA3O75528 432 aa18.69■□□□□ 0.58
SBDSP1-203ENST00000437201 ZNF202O95125 648 aa18.69■□□□□ 0.58
SBDSP1-203ENST00000437201 HDCP19113 662 aa18.69■□□□□ 0.58
SBDSP1-203ENST00000437201 DPYDQ12882 1025 aa18.69■□□□□ 0.58
SBDSP1-203ENST00000437201 NFIL3Q16649 462 aa18.69■□□□□ 0.58
SBDSP1-203ENST00000437201 PLEKHO2Q8TD55 490 aa18.69■□□□□ 0.58
SBDSP1-203ENST00000437201 SECISBP2LQ93073 1101 aaKnown RBP18.69■□□□□ 0.58
SBDSP1-203ENST00000437201 PTPRZ1P23471 2315 aaPredicted RBP18.69■□□□□ 0.58
SBDSP1-203ENST00000437201 PATJQ8NI35 1801 aa18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 GOLGA6L4A6NEF3 574 aa18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 F8VP50 259 aa18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 ENPEPQ07075 957 aa18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 GRSF1Q12849 480 aaKnown RBP eCLIP18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 MTF1Q14872 753 aa18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 PON2Q15165 354 aa18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 ZACNQ401N2 412 aa18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 TXNDC11Q6PKC3 985 aa18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 INTS8Q75QN2 995 aaKnown RBP18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 GUF1Q8N442 669 aaKnown RBP18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 CPA6Q8N4T0 437 aa18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 ATP2A3Q93084 1043 aa18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 CHAMP1Q96JM3 812 aa18.68■□□□□ 0.58
SBDSP1-203ENST00000437201 SLITRK1Q96PX8 696 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms