RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 B3GALNT2Q8NCR0 500 aa19.52■□□□□ 0.72
HMGN1-207ENST00000436324 CSGALNACT1Q8TDX6 532 aa19.52■□□□□ 0.72
HMGN1-207ENST00000436324 TIGD1Q96MW7 591 aa19.52■□□□□ 0.72
HMGN1-207ENST00000436324 GSDMAQ96QA5 445 aa19.52■□□□□ 0.72
HMGN1-207ENST00000436324 B3GNT5Q9BYG0 378 aa19.52■□□□□ 0.72
HMGN1-207ENST00000436324 DLGAP2Q9P1A6 1054 aa19.52■□□□□ 0.72
HMGN1-207ENST00000436324 HOOK1Q9UJC3 728 aaKnown RBP19.52■□□□□ 0.72
HMGN1-207ENST00000436324 PIAS3Q9Y6X2 628 aa19.52■□□□□ 0.72
HMGN1-207ENST00000436324 CHADO15335 359 aa19.51■□□□□ 0.71
HMGN1-207ENST00000436324 TADA3O75528 432 aa19.51■□□□□ 0.71
HMGN1-207ENST00000436324 P4HA1P13674 534 aa19.51■□□□□ 0.71
HMGN1-207ENST00000436324 AVPR1AP37288 418 aa19.51■□□□□ 0.71
HMGN1-207ENST00000436324 PPP3CAQ08209 521 aa19.51■□□□□ 0.71
HMGN1-207ENST00000436324 ORC1Q13415 861 aa19.51■□□□□ 0.71
HMGN1-207ENST00000436324 TTC16Q8NEE8 873 aa19.51■□□□□ 0.71
HMGN1-207ENST00000436324 BPIFB1Q8TDL5 484 aa19.51■□□□□ 0.71
HMGN1-207ENST00000436324 TRMT2BQ96GJ1 504 aaKnown RBP19.51■□□□□ 0.71
HMGN1-207ENST00000436324 MED10Q9BTT4 135 aa19.51■□□□□ 0.71
HMGN1-207ENST00000436324 ZNF518BQ9C0D4 1074 aa19.51■□□□□ 0.71
HMGN1-207ENST00000436324 CCL26Q9Y258 94 aa19.51■□□□□ 0.71
HMGN1-207ENST00000436324 SHISA7A6NL88 538 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 F8VP50 259 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 CETN3O15182 167 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 KINO60870 393 aaKnown RBP19.5■□□□□ 0.71
HMGN1-207ENST00000436324 DDX6P26196 483 aaKnown RBP eCLIP19.5■□□□□ 0.711e-5■■■□□ 17.8
HMGN1-207ENST00000436324 WEE1P30291 646 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 SOX9P48436 509 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 KPNA1P52294 538 aaPredicted RBP19.5■□□□□ 0.71
HMGN1-207ENST00000436324 CACNA2D1P54289 1103 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 USP46P62068 366 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 FCHO2Q0JRZ9 810 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 EDRF1Q3B7T1 1238 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 ACOT1Q86TX2 421 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 MON1AQ86VX9 555 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 CELF5Q8N6W0 485 aaKnown RBP19.5■□□□□ 0.71
HMGN1-207ENST00000436324 TAS1R2Q8TE23 839 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 USP13Q92995 863 aaPredicted RBP19.5■□□□□ 0.71
HMGN1-207ENST00000436324 SPATA17Q96L03 361 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 MYRFLQ96LU7 910 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 TSG101Q99816 390 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 BCO2Q9BYV7 579 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 TRPV5Q9NQA5 729 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 OBP2AQ9NY56 170 aa19.5■□□□□ 0.71
HMGN1-207ENST00000436324 CIZ1Q9ULV3 898 aaPredicted RBP19.5■□□□□ 0.71
HMGN1-207ENST00000436324 MRPS17Q9Y2R5 130 aaKnown RBP19.5■□□□□ 0.71
HMGN1-207ENST00000436324 ARNTLO00327 626 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 MAN2B1O00754 1011 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 TRIM66O15016 1216 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 ASS1P00966 412 aaKnown RBP19.49■□□□□ 0.71
HMGN1-207ENST00000436324 EPB41P11171 864 aaKnown RBP19.49■□□□□ 0.71
HMGN1-207ENST00000436324 CCNE1P24864 410 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 IFRD2Q12894 506 aaPredicted RBP19.49■□□□□ 0.71
HMGN1-207ENST00000436324 ARHGAP29Q52LW3 1261 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 ANKRD40Q6AI12 368 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 DENND5BQ6ZUT9 1274 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 SPATA20Q8TB22 786 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 FAM3CQ92520 227 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 TAF4BQ92750 862 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 C8orf48Q96LL4 319 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 CYP2S1Q96SQ9 504 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 NELL2Q99435 816 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 OSBPL6Q9BZF3 934 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 IMPG2Q9BZV3 1241 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 TMEM30AQ9NV96 361 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 SPATA6Q9NWH7 488 aaPredicted RBP19.49■□□□□ 0.71
HMGN1-207ENST00000436324 ZMYM5Q9UJ78 669 aa19.49■□□□□ 0.71
HMGN1-207ENST00000436324 TRIM49BA6NDI0 452 aa19.48■□□□□ 0.71
HMGN1-207ENST00000436324 NDST1P52848 882 aa19.48■□□□□ 0.71
HMGN1-207ENST00000436324 PMS1P54277 932 aaKnown RBP19.48■□□□□ 0.71
HMGN1-207ENST00000436324 TNK2Q07912 1038 aa19.48■□□□□ 0.71
HMGN1-207ENST00000436324 C1orf210Q8IVY1 113 aa19.48■□□□□ 0.71
HMGN1-207ENST00000436324 ADSSL1Q8N142 457 aa19.48■□□□□ 0.71
HMGN1-207ENST00000436324 TNIP3Q96KP6 325 aa19.48■□□□□ 0.71
HMGN1-207ENST00000436324 SLC22A12Q96S37 553 aa19.48■□□□□ 0.71
HMGN1-207ENST00000436324 ELOVL4Q9GZR5 314 aa19.48■□□□□ 0.71
HMGN1-207ENST00000436324 APOBEC3GQ9HC16 384 aaKnown RBP19.48■□□□□ 0.71
HMGN1-207ENST00000436324 GKN1Q9NS71 199 aa19.48■□□□□ 0.71
HMGN1-207ENST00000436324 TDP1Q9NUW8 608 aa19.48■□□□□ 0.71
HMGN1-207ENST00000436324 THG1LQ9NWX6 298 aaKnown RBP19.48■□□□□ 0.71
HMGN1-207ENST00000436324 GTSE1Q9NYZ3 720 aa19.48■□□□□ 0.71
HMGN1-207ENST00000436324 HMGXB4Q9UGU5 601 aa19.48■□□□□ 0.71
HMGN1-207ENST00000436324 MAN1B1Q9UKM7 699 aa19.48■□□□□ 0.71
HMGN1-207ENST00000436324 TRAV19A0A0A6YYK7 116 aa19.47■□□□□ 0.71
HMGN1-207ENST00000436324 C2orf78A6NCI8 922 aa19.47■□□□□ 0.71
HMGN1-207ENST00000436324 NCAM2O15394 837 aa19.47■□□□□ 0.71
HMGN1-207ENST00000436324 ASPAP45381 313 aa19.47■□□□□ 0.71
HMGN1-207ENST00000436324 NOP14P78316 857 aaKnown RBP19.47■□□□□ 0.71
HMGN1-207ENST00000436324 TCERG1LQ5VWI1 586 aa19.47■□□□□ 0.71
HMGN1-207ENST00000436324 FRMD5Q7Z6J6 570 aa19.47■□□□□ 0.71
HMGN1-207ENST00000436324 FAM35AQ86V20 835 aa19.47■□□□□ 0.71
HMGN1-207ENST00000436324 ARL14EPQ8N8R7 260 aaPredicted RBP19.47■□□□□ 0.71
HMGN1-207ENST00000436324 TMEM8AQ9HCN3 771 aa19.47■□□□□ 0.71
HMGN1-207ENST00000436324 TRPM5Q9NZQ8 1165 aa19.47■□□□□ 0.71
HMGN1-207ENST00000436324 ATP8B3O60423 1300 aa19.47■□□□□ 0.71
HMGN1-207ENST00000436324 ABL1P00519 1130 aa19.46■□□□□ 0.71
HMGN1-207ENST00000436324 CKMP06732 381 aa19.46■□□□□ 0.71
HMGN1-207ENST00000436324 USP17L7P0C7H9 530 aa19.46■□□□□ 0.71
HMGN1-207ENST00000436324 CCDC130P13994 396 aa19.46■□□□□ 0.71
HMGN1-207ENST00000436324 COBLL1Q53SF7 1204 aa19.46■□□□□ 0.71
HMGN1-207ENST00000436324 KRT39Q6A163 491 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms