RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 NLGN2Q8NFZ4 835 aa16.27■□□□□ 0.19
NEDD4-202ENST00000435532 C20orf96Q9NUD7 363 aaPredicted RBP16.27■□□□□ 0.19
NEDD4-202ENST00000435532 TAF6LQ9Y6J9 622 aa16.27■□□□□ 0.19
NEDD4-202ENST00000435532 GNRH1P01148 92 aa16.27■□□□□ 0.19
NEDD4-202ENST00000435532 FGFR4P22455 802 aa16.27■□□□□ 0.19
NEDD4-202ENST00000435532 ERAP2Q6P179 960 aa16.27■□□□□ 0.19
NEDD4-202ENST00000435532 VSIG10LQ86VR7 867 aa16.27■□□□□ 0.19
NEDD4-202ENST00000435532 PITPNM3Q9BZ71 974 aa16.27■□□□□ 0.19
NEDD4-202ENST00000435532 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.26■□□□□ 0.19
NEDD4-202ENST00000435532 SPECC1L-ADORA2AF8WAN1 911 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 PTGER2P43116 358 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 RAP1GAPP47736 663 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 MYL6P60660 151 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 EFTUD2Q15029 972 aaKnown RBP eCLIP16.26■□□□□ 0.192e-7■■■■□ 21.3
NEDD4-202ENST00000435532 PRAMEF19Q5SWL8 479 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 PDCD7Q8N8D1 485 aaKnown RBP16.26■□□□□ 0.19
NEDD4-202ENST00000435532 CELF4Q9BZC1 486 aaKnown RBP16.26■□□□□ 0.19
NEDD4-202ENST00000435532 GOLPH3Q9H4A6 298 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 CD274Q9NZQ7 290 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 SNCAIPQ9Y6H5 919 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 USP10Q14694 798 aaKnown RBP16.26■□□□□ 0.19
NEDD4-202ENST00000435532 NCAPHQ15003 741 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 RETSATQ6NUM9 610 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 MOB2Q70IA6 237 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 ERGIC2Q96RQ1 377 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 SF3B1O75533 1304 aaKnown RBP eCLIP16.26■□□□□ 0.19
NEDD4-202ENST00000435532 TLL1O43897 1013 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 CST8O60676 142 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 SPRP35270 261 aaPredicted RBP16.26■□□□□ 0.19
NEDD4-202ENST00000435532 NR1I3Q14994 352 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 SPRYD7Q5W111 196 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 CLEC17AQ6ZS10 378 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 SEZ6LQ9BYH1 1024 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.26■□□□□ 0.19
NEDD4-202ENST00000435532 CCR1P32246 355 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 LIG3P49916 1009 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 PHKG1Q16816 387 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 PTF1AQ7RTS3 328 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 NFKBIZQ9BYH8 718 aa16.26■□□□□ 0.19
NEDD4-202ENST00000435532 A0A1B0GUA9 196 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 TBX4P57082 545 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 TRAPPC12Q8WVT3 735 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 SERPINB11Q96P15 392 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 CISHQ9NSE2 258 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 PPP1R3GB7ZBB8 358 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 FBXL16Q8N461 479 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 ADGRE3Q9BY15 652 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 STK39Q9UEW8 545 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 RAB23Q9ULC3 237 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 FAM86B1E9PN63 330 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 SEC31AO94979 1220 aaKnown RBP16.25■□□□□ 0.19
NEDD4-202ENST00000435532 FAM86B2P0C5J1 330 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 VCPP55072 806 aaKnown RBP16.25■□□□□ 0.19
NEDD4-202ENST00000435532 CD99L2Q8TCZ2 262 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 TSPAN18Q96SJ8 248 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 PDGFDQ9GZP0 370 aaPredicted RBP16.25■□□□□ 0.19
NEDD4-202ENST00000435532 NDE1Q9NXR1 346 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 SPACA6W5XKT8 324 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 ADH1AP07327 375 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 COMTP21964 271 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 CCL23P55773 120 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 PKN1Q16512 942 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 APBB2Q92870 758 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 SLC13A1Q9BZW2 595 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 INTS13Q9NVM9 706 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 PPARGC1AQ9UBK2 798 aaKnown RBP16.25■□□□□ 0.19
NEDD4-202ENST00000435532 ZDHHC9Q9Y397 364 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 LOC102724159A0A0B4J2E5 919 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 PIK3CDO00329 1044 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 CAND2O75155 1236 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 SLITRK3O94933 977 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 SGCGQ13326 291 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 PPIGQ13427 754 aaKnown RBP eCLIP16.25■□□□□ 0.19
NEDD4-202ENST00000435532 PWP2Q15269 919 aaKnown RBP16.25■□□□□ 0.19
NEDD4-202ENST00000435532 NOMO2Q5JPE7 1267 aa16.25■□□□□ 0.19
NEDD4-202ENST00000435532 SUPT3HO75486 399 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 RHOBTB1O94844 696 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 PON1P27169 355 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 ABCE1P61221 599 aaKnown RBP16.24■□□□□ 0.19
NEDD4-202ENST00000435532 TRIM65Q6PJ69 517 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 RRAGDQ9NQL2 400 aaPredicted RBP16.24■□□□□ 0.19
NEDD4-202ENST00000435532 KBTBD4Q9NVX7 518 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 FRMPD4Q14CM0 1322 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 PPP3CCP48454 512 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 ORC1Q13415 861 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 MIPOL1Q8TD10 442 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 ATXN7L3BQ96GX2 97 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 ABCB6Q9NP58 842 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 TAL1P17542 331 aaPredicted RBP16.24■□□□□ 0.19
NEDD4-202ENST00000435532 CHRM3P20309 590 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 GTF2A1P52655 376 aaPredicted RBP16.24■□□□□ 0.19
NEDD4-202ENST00000435532 CRYBB1P53674 252 aaPredicted RBP16.24■□□□□ 0.19
NEDD4-202ENST00000435532 CASP8Q14790 479 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 CCDC157Q569K6 752 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 MRNIPQ6NTE8 343 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 BRSK2Q8IWQ3 736 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 C1QTNF7Q9BXJ2 289 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 SLC39A10Q9ULF5 831 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 RWDD3Q9Y3V2 267 aa16.24■□□□□ 0.19
NEDD4-202ENST00000435532 CCDC195A0A1B0GUA6 201 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms