RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 MFHAS1Q9Y4C4 1052 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PARP14Q460N5 1801 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 IRF6O14896 467 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 TMCC1O94876 653 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PENKP01210 267 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PYGLP06737 847 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 VCAM1P19320 739 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CYP2J2P51589 502 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 FMR1Q06787 632 aaKnown RBP eCLIP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 DGKDQ16760 1214 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 WASHC2DQ5SRD0 308 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PLEKHA7Q6IQ23 1121 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 AVL9Q8NBF6 648 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 MTIF3Q9H2K0 278 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 DCLRE1BQ9H816 532 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 MAGEE1Q9HCI5 957 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 NRCAMQ92823 1304 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CD19P15391 556 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 SSR1P43307 286 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 MAGEA6P43360 314 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 SPIRE1Q08AE8 756 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CRYMQ14894 314 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 RFX4Q33E94 735 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 EPC2Q52LR7 807 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 VARS2Q5ST30 1063 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 ILDR2Q71H61 639 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 FBXO44Q9H4M3 255 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 KCNH4Q9UQ05 1017 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CROCCQ5TZA2 2017 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 NINQ8N4C6 2090 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 LRRIQ4A6NIV6 560 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 VDRP11473 427 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PSMA2P25787 234 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 RPL3P39023 403 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 SERPINB10P48595 397 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CCNHP51946 323 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 BST2Q10589 180 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 ZBTB17Q13105 803 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 RRP1BQ14684 758 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PTGISQ16647 500 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 DPY19L1Q2PZI1 675 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PREPLQ4J6C6 727 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 FAM102BQ5T8I3 360 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CHST3Q7LGC8 479 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 LRRC47Q8N1G4 583 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PDCD6IPQ8WUM4 868 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 HAS1Q92839 578 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CCT8L2Q96SF2 557 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 ABHD16BQ9H3Z7 469 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 INTS13Q9NVM9 706 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF112Q9UJU3 913 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 ANKHD1Q8IWZ3 2542 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PRAMEF22A3QJZ6 481 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 KLHL41O60662 606 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 FKBP6O75344 327 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 FKBP9O95302 570 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 GNA15P30679 374 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PRKCEQ02156 737 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 RAD51Q06609 339 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 POTEGQ6S5H5 508 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 MPZL3Q6UWV2 235 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 SLC26A9Q7LBE3 791 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 FATE1Q969F0 183 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 ELOVL4Q9GZR5 314 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 EPB41L5Q9HCM4 733 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CORO2BQ9UQ03 480 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PLAAQ9Y263 795 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 LOC285556D6RIA3 1793 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 SNRPAP09012 282 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 VCLP18206 1134 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 GALCP54803 685 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 NCOA4Q13772 614 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PGM5Q15124 567 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 RBBP5Q15291 538 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PPP6R3Q5H9R7 873 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 MIIPQ5JXC2 388 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 EDC3Q96F86 508 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 APOPT1Q96IL0 206 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 MAGED4Q96JG8 741 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 AAR2Q9Y312 384 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CFAP99D6REC4 459 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 APOL1O14791 398 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 IPO13O94829 963 aaKnown RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 SOX30O94993 753 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 GSTM1P09488 218 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 KRT3P12035 628 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 DSG3P32926 999 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 GSTM4Q03013 218 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF33BQ06732 778 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 DDR1Q08345 913 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 STX5Q13190 355 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 MAD2L1Q13257 205 aaPredicted RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 TAF11Q15544 211 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 FAM110CQ1W6H9 321 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 C16orf89Q6UX73 402 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 PACRGLQ8N7B6 248 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 OXER1Q8TDS5 423 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms