RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 SLC8A2Q9UPR5 921 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 KIF26AQ9ULI4 1882 aaPredicted RBP17.31■□□□□ 0.36
ACTB-205ENST00000432588 CCDC163A0A0D9SF12 145 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 OTOL1A6NHN0 477 aaPredicted RBP17.31■□□□□ 0.36
ACTB-205ENST00000432588 HCRTO43612 131 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 DLATP10515 647 aaKnown RBP17.31■□□□□ 0.36
ACTB-205ENST00000432588 TNNI1P19237 187 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 DRD1P21728 446 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 WARSP23381 471 aaKnown RBP17.31■□□□□ 0.36
ACTB-205ENST00000432588 LMO2P25791 158 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 ANXA13P27216 316 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 HOXD13P35453 343 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 IFNAR2P48551 515 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 PSMC1P62191 440 aaKnown RBP17.31■□□□□ 0.36
ACTB-205ENST00000432588 CYP27A1Q02318 531 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 CCDC142Q17RM4 750 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 FBXO43Q4G163 708 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 FSTL4Q6MZW2 842 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 EPM2AIP1Q7L775 607 aaPredicted RBP17.31■□□□□ 0.36
ACTB-205ENST00000432588 HS2ST1Q7LGA3 356 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 TRAPPC11Q7Z392 1133 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 RDH13Q8NBN7 331 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 OSCP1Q8WVF1 389 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 KBTBD7Q8WVZ9 684 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 ATP2A3Q93084 1043 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 MYLPFQ96A32 169 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 SPATA17Q96L03 361 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 CYP2S1Q96SQ9 504 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 C7orf25Q9BPX7 421 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 SNX25Q9H3E2 840 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 AGPAT3Q9NRZ7 376 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 DUS2Q9NX74 493 aaKnown RBP17.31■□□□□ 0.36
ACTB-205ENST00000432588 DENND4CQ5VZ89 1909 aa17.31■□□□□ 0.36
ACTB-205ENST00000432588 ATP2C2O75185 946 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 PDGFRBP09619 1106 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 BDNFP23560 247 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 GRIK1P39086 918 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 CYP2J2P51589 502 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 NR1H3Q13133 447 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 ZNF77Q15935 545 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 CSRP2Q16527 193 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 SHC4Q6S5L8 630 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 XXYLT1Q8NBI6 393 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 RIN3Q8TB24 985 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 NETO1Q8TDF5 533 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 SLC22A12Q96S37 553 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 CGRRF1Q99675 332 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 P2RY13Q9BPV8 354 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 ECT2Q9H8V3 914 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 CRTAC1Q9NQ79 661 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 SEMA4GQ9NTN9 838 aa17.3■□□□□ 0.36
ACTB-205ENST00000432588 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.3■□□□□ 0.36
ACTB-205ENST00000432588 ZNF638Q14966 1978 aaKnown RBP17.29■□□□□ 0.36
ACTB-205ENST00000432588 OBSL1O75147 1896 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 TRIM66O15016 1216 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 POLR2DO15514 142 aaKnown RBP17.29■□□□□ 0.36
ACTB-205ENST00000432588 TGFB1I1O43294 461 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 RNF40O75150 1001 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 EGFP01133 1207 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 PFKLP17858 780 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 HDCP19113 662 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 GJA4P35212 333 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 GNL1P36915 607 aaPredicted RBP17.29■□□□□ 0.36
ACTB-205ENST00000432588 GALK1P51570 392 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 TNNC1P63316 161 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 CYP24A1Q07973 514 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 USP4Q13107 963 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 PSMD6Q15008 389 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 PRR23CQ6ZRP0 262 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 DENND5BQ6ZUT9 1274 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 UNC13DQ70J99 1090 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 NELFCDQ8IXH7 590 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 CAMKK1Q8N5S9 505 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 FAM160A2Q8N612 972 aaPredicted RBP17.29■□□□□ 0.36
ACTB-205ENST00000432588 ARL14EPQ8N8R7 260 aaPredicted RBP17.29■□□□□ 0.36
ACTB-205ENST00000432588 MYCBPAPQ8TBZ2 947 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 GAB3Q8WWW8 586 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 CCDC127Q96BQ5 260 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 CHFRQ96EP1 664 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 FAM13BQ9NYF5 915 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 TRPM5Q9NZQ8 1165 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 GCNT4Q9P109 453 aa17.29■□□□□ 0.36
ACTB-205ENST00000432588 CGNQ9P2M7 1197 aaKnown RBP17.29■□□□□ 0.36
ACTB-205ENST00000432588 C2orf78A6NCI8 922 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 CLIC2O15247 247 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 TACC1O75410 805 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 RPP40O75818 363 aaKnown RBP17.28■□□□□ 0.36
ACTB-205ENST00000432588 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
ACTB-205ENST00000432588 FAM163BP0C2L3 166 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 CCDC192P0DO97 292 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 PPP3CCP48454 512 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 TRPC3Q13507 836 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 FOXD4L5Q5VV16 416 aaPredicted RBP17.28■□□□□ 0.36
ACTB-205ENST00000432588 PKN3Q6P5Z2 889 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 CACNA2D4Q7Z3S7 1137 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 CCDC26Q8TAB7 109 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 SH3RF2Q8TEC5 729 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 SCFD1Q8WVM8 642 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 FOXD4L4Q8WXT5 416 aaPredicted RBP17.28■□□□□ 0.36
ACTB-205ENST00000432588 CD101Q93033 1021 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms