RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TARM1B6A8C7 271 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 FAM227AF5H4B4 570 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 FESP07332 822 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 IL6RP08887 468 aaPredicted RBP4.19□□□□□ -1.74
CLK1-204ENST00000432425 ENGP17813 658 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 ARFIP2P53365 341 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 ATXN1P54253 815 aaKnown RBP4.19□□□□□ -1.74
CLK1-204ENST00000432425 SP2Q02086 613 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 SRSF4Q08170 494 aaKnown RBP4.19□□□□□ -1.74
CLK1-204ENST00000432425 SLC10A2Q12908 348 aaPredicted RBP4.19□□□□□ -1.74
CLK1-204ENST00000432425 MYO1EQ12965 1108 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 SLC13A2Q13183 592 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 CTBP1Q13363 440 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 PCID2Q5JVF3 399 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 KIAA1614Q5VZ46 1190 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 MAEAQ7L5Y9 396 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 SRRM1Q8IYB3 904 aaKnown RBP4.19□□□□□ -1.74
CLK1-204ENST00000432425 XAGE5Q8WWM1 108 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 R3HDM4Q96D70 268 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 SUCLG2Q96I99 432 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 MESP1Q9BRJ9 268 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 MS4A7Q9GZW8 240 aaPredicted RBP4.19□□□□□ -1.74
CLK1-204ENST00000432425 TMEM60Q9H2L4 133 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 C1orf112Q9NSG2 853 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 TRMT13Q9NUP7 481 aaKnown RBP4.19□□□□□ -1.74
CLK1-204ENST00000432425 DLL3Q9NYJ7 618 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 PAXBP1Q9Y5B6 917 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 EID1Q9Y6B2 187 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 AOX1Q06278 1338 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 LINC01548A6NM66 108 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 ERC2O15083 957 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 EN2P19622 333 aaPredicted RBP4.18□□□□□ -1.74
CLK1-204ENST00000432425 LMO1P25800 156 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 PRKAG1P54619 331 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 FOXF2Q12947 444 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 LRRC41Q15345 812 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 NFE2Q16621 373 aaPredicted RBP4.18□□□□□ -1.74
CLK1-204ENST00000432425 TMEM119Q4V9L6 283 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 ARHGAP29Q52LW3 1261 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 DEPDC1Q5TB30 811 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 GAS2L3Q86XJ1 694 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 ZNF280BQ86YH2 543 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 IL31RAQ8NI17 732 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 OSCP1Q8WVF1 389 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 RAPGEF4Q8WZA2 1011 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 DPH1Q9BZG8 443 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 CXorf36Q9H7Y0 433 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 FAM204AQ9H8W3 233 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 DUSP22Q9NRW4 184 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 TNFRSF18Q9Y5U5 241 aa4.18□□□□□ -1.74
CLK1-204ENST00000432425 NPSP0C0P6 89 aa4.17□□□□□ -1.74
CLK1-204ENST00000432425 ABCG1P45844 678 aa4.17□□□□□ -1.74
CLK1-204ENST00000432425 DGKEP52429 567 aa4.17□□□□□ -1.74
CLK1-204ENST00000432425 GRM1Q13255 1194 aa4.17□□□□□ -1.74
CLK1-204ENST00000432425 LLGL1Q15334 1064 aa4.17□□□□□ -1.74
CLK1-204ENST00000432425 ZIK1Q3SY52 487 aaPredicted RBP4.17□□□□□ -1.74
CLK1-204ENST00000432425 PLA1AQ53H76 456 aa4.17□□□□□ -1.74
CLK1-204ENST00000432425 NXNQ6DKJ4 435 aa4.17□□□□□ -1.74
CLK1-204ENST00000432425 PARS2Q7L3T8 475 aaKnown RBP4.17□□□□□ -1.74
CLK1-204ENST00000432425 TCEAL8Q8IYN2 117 aa4.17□□□□□ -1.74
CLK1-204ENST00000432425 MAGEB6Q8N7X4 407 aa4.17□□□□□ -1.74
CLK1-204ENST00000432425 RP9Q8TA86 221 aaKnown RBP4.17□□□□□ -1.74
CLK1-204ENST00000432425 DPCDQ9BVM2 203 aaPredicted RBP4.17□□□□□ -1.74
CLK1-204ENST00000432425 ZNF518BQ9C0D4 1074 aa4.17□□□□□ -1.74
CLK1-204ENST00000432425 ATP6V0A4Q9HBG4 840 aa4.17□□□□□ -1.74
CLK1-204ENST00000432425 SERGEFQ9UGK8 458 aa4.17□□□□□ -1.74
CLK1-204ENST00000432425 ADAMTS5Q9UNA0 930 aa4.17□□□□□ -1.74
CLK1-204ENST00000432425 CFAP69A5D8W1 941 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 PRPF3O43395 683 aaKnown RBP4.16□□□□□ -1.74
CLK1-204ENST00000432425 ERBB2P04626 1255 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 CSF1RP07333 972 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 DLDP09622 509 aaKnown RBP4.16□□□□□ -1.74
CLK1-204ENST00000432425 ADORA2AP29274 412 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 MLC1Q15049 377 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 CNN3Q15417 329 aaKnown RBP4.16□□□□□ -1.74
CLK1-204ENST00000432425 TBC1D25Q3MII6 688 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 PPP4R4Q6NUP7 873 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 NAPRTQ6XQN6 538 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 COL23A1Q86Y22 540 aaPredicted RBP4.16□□□□□ -1.74
CLK1-204ENST00000432425 ANKRD13AQ8IZ07 590 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 KIAA0319LQ8IZA0 1049 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 SEMA6DQ8NFY4 1073 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 BPIFB1Q8TDL5 484 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 DDB2Q92466 427 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 DPF1Q92782 380 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 FSD1LQ9BXM9 530 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 SMURF2Q9HAU4 748 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 WIPF3A6NGB9 483 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 TMEM233B4DJY2 109 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 SMIM22K7EJ46 135 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 ZNF213O14771 459 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 PRKCBP05771 671 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 BRAFP15056 766 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 KCNA3P22001 575 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 EZH2Q15910 746 aaKnown RBP4.16□□□□□ -1.74
CLK1-204ENST00000432425 SRSF7Q16629 238 aaKnown RBP eCLIP4.16□□□□□ -1.74
CLK1-204ENST00000432425 DCAF12L1Q5VU92 463 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 Q6ZWC4 215 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 IZUMO1Q8IYV9 350 aa4.16□□□□□ -1.74
CLK1-204ENST00000432425 SPARTQ8N0X7 666 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms