RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 FOXN3O00409 490 aaPredicted RBP19.55■□□□□ 0.72
RFTN1-202ENST00000431547 TRIM66O15016 1216 aa19.55■□□□□ 0.72
RFTN1-202ENST00000431547 KRT5P13647 590 aa19.55■□□□□ 0.72
RFTN1-202ENST00000431547 VEPH1Q14D04 833 aa19.55■□□□□ 0.72
RFTN1-202ENST00000431547 SGO2Q562F6 1265 aa19.55■□□□□ 0.72
RFTN1-202ENST00000431547 PPP1R26Q5T8A7 1209 aaPredicted RBP19.55■□□□□ 0.72
RFTN1-202ENST00000431547 GRASPQ7Z6J2 395 aaPredicted RBP19.55■□□□□ 0.72
RFTN1-202ENST00000431547 DNAJB7Q7Z6W7 309 aaPredicted RBP19.55■□□□□ 0.72
RFTN1-202ENST00000431547 NEK11Q8NG66 645 aa19.55■□□□□ 0.72
RFTN1-202ENST00000431547 PSMG2Q969U7 264 aa19.55■□□□□ 0.72
RFTN1-202ENST00000431547 CSNK1G1Q9HCP0 422 aa19.55■□□□□ 0.72
RFTN1-202ENST00000431547 AVENQ9NQS1 362 aaPredicted RBP19.55■□□□□ 0.72
RFTN1-202ENST00000431547 F8VP50 259 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 AP1G2O75843 785 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 SLC34A2O95436 690 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 CD19P15391 556 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 ANXA13P27216 316 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 ADORA2BP29275 332 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 GPR15P49685 360 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 KCNQ1P51787 676 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 CACNA2D1P54289 1103 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 EPHA5P54756 1037 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 POLR2FP61218 127 aaKnown RBP19.54■□□□□ 0.72
RFTN1-202ENST00000431547 DRAP1Q14919 205 aaPredicted RBP19.54■□□□□ 0.72
RFTN1-202ENST00000431547 FAM71AQ8IYT1 594 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 LEMD2Q8NC56 503 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 GIPC2Q8TF65 315 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 CORO1BQ9BR76 489 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 GPR88Q9GZN0 384 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 POMKQ9H5K3 350 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 DMAP1Q9NPF5 467 aaPredicted RBP19.54■□□□□ 0.72
RFTN1-202ENST00000431547 KRT82Q9NSB4 513 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 TMEM30AQ9NV96 361 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 HCFC1R1Q9NWW0 138 aa19.54■□□□□ 0.72
RFTN1-202ENST00000431547 EPHB6O15197 1021 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 RHOP08100 348 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 FAM200BP0CF97 657 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 CSH1P0DML2 217 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 CSH2P0DML3 217 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 BMP1P13497 986 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 USP8P40818 1118 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 RAPGEF1Q13905 1077 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 STILQ15468 1287 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 CNGA2Q16280 664 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 PABPC1LQ4VXU2 614 aaKnown RBP19.53■□□□□ 0.72
RFTN1-202ENST00000431547 SDHAF4Q5VUM1 108 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 GAS2L3Q86XJ1 694 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.53■□□□□ 0.72
RFTN1-202ENST00000431547 ANKRD52Q8NB46 1076 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 GPR152Q8TDT2 470 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 TFAP2BQ92481 460 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 KCNK16Q96T55 309 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 SMOQ99835 787 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 LRRC3Q9BY71 257 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 DUSP16Q9BY84 665 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 RBSNQ9H1K0 784 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 IFNKQ9P0W0 207 aa19.53■□□□□ 0.72
RFTN1-202ENST00000431547 CLUHO75153 1309 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 EYSQ5T1H1 3165 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 SLC38A8A6NNN8 435 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 O00370 1275 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 IL9P15248 144 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 HMGA1P17096 107 aaKnown RBP19.52■□□□□ 0.72
RFTN1-202ENST00000431547 NTHL1P78549 312 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 TAF12Q16514 161 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 CYP4A22Q5TCH4 519 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 LCLAT1Q6UWP7 414 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 CLEC20AQ6ZU45 233 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 HS6ST3Q8IZP7 471 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 MYRFLQ96LU7 910 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 ZSWIM1Q9BR11 485 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 PHF7Q9BWX1 381 aaPredicted RBP19.52■□□□□ 0.72
RFTN1-202ENST00000431547 ASAH2Q9NR71 780 aa19.52■□□□□ 0.72
RFTN1-202ENST00000431547 F8VZ95 297 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 ZNF197O14709 1029 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 CYP26A1O43174 497 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 CBFA2T2O43439 604 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 BEST1O76090 585 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 MICAL2O94851 1124 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 FGF19O95750 216 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 TPM3P06753 285 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 NPR3P17342 541 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 FSHRP23945 695 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 CLCN1P35523 988 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 PBX1P40424 430 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 MAP3K7CLP57077 242 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 JAM2P57087 298 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 BPIFB4P59827 614 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 PTK2Q05397 1052 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 DENND5BQ6ZUT9 1274 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 PDZD4Q76G19 769 aaPredicted RBP19.51■□□□□ 0.71
RFTN1-202ENST00000431547 TMC8Q8IU68 726 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 ZMIZ2Q8NF64 920 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 TRMT2BQ96GJ1 504 aaKnown RBP19.51■□□□□ 0.71
RFTN1-202ENST00000431547 UBXN6Q9BZV1 441 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 XPO4Q9C0E2 1151 aaKnown RBP19.51■□□□□ 0.71
RFTN1-202ENST00000431547 PNPLA8Q9NP80 782 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 NLRC4Q9NPP4 1024 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 EHD2Q9NZN4 543 aa19.51■□□□□ 0.71
RFTN1-202ENST00000431547 HESX1Q9UBX0 185 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms