RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 PNLDC1Q8NA58 520 aaKnown RBP5.88□□□□□ -1.47
PTPN4-204ENST00000431283 ABHD11Q8NFV4 315 aa5.88□□□□□ -1.47
PTPN4-204ENST00000431283 ATG4AQ8WYN0 398 aa5.88□□□□□ -1.47
PTPN4-204ENST00000431283 R3HDM4Q96D70 268 aa5.88□□□□□ -1.47
PTPN4-204ENST00000431283 DAZAP1Q96EP5 407 aaKnown RBP5.88□□□□□ -1.47
PTPN4-204ENST00000431283 FCRL4Q96PJ5 515 aa5.88□□□□□ -1.47
PTPN4-204ENST00000431283 CPA4Q9UI42 421 aa5.88□□□□□ -1.47
PTPN4-204ENST00000431283 TMX2Q9Y320 296 aa5.88□□□□□ -1.47
PTPN4-204ENST00000431283 A1L4Q6 167 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 PRRT4C9JH25 899 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 PROB1E7EW31 1015 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 ZNF213O14771 459 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 DCLK1O15075 740 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 DLDP09622 509 aaKnown RBP5.87□□□□□ -1.47
PTPN4-204ENST00000431283 XRCC6P12956 609 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTPN4-204ENST00000431283 VIPR2P41587 438 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 MMP13P45452 471 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 NKX6-1P78426 367 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-204ENST00000431283 GPSM2P81274 684 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 KRT17Q04695 432 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 ETFDHQ16134 617 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 TRIM72Q6ZMU5 477 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 ZNF66Q6ZN08 573 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 CNGA4Q8IV77 575 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 GLG1Q92896 1179 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 REPS1Q96D71 796 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 ASB2Q96Q27 587 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 NUP88Q99567 741 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-204ENST00000431283 DPCDQ9BVM2 203 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-204ENST00000431283 AASDHPPTQ9NRN7 309 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 SSX2IPQ9Y2D8 614 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 STXBP5LQ9Y2K9 1186 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTPN4-204ENST00000431283 GAPVD1Q14C86 1478 aa5.87□□□□□ -1.47
PTPN4-204ENST00000431283 CLASP1Q7Z460 1538 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 ZNF521Q96K83 1311 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 TISP43B9A030 160 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 LATS1O95835 1130 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 CYP2C9P11712 490 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 CTGFP29279 349 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 LRPAP1P30533 357 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 CYP4F2P78329 520 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 SSBP2P81877 361 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-204ENST00000431283 CERKLQ49MI3 558 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-204ENST00000431283 SLC15A3Q8IY34 581 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 SH2D3AQ9BRG2 576 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 FSD1LQ9BXM9 530 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 ARMT1Q9H993 441 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 TRMT13Q9NUP7 481 aaKnown RBP5.86□□□□□ -1.47
PTPN4-204ENST00000431283 XPR1Q9UBH6 696 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 IP6K2Q9UHH9 426 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 BTBD3Q9Y2F9 522 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 ANKRD6Q9Y2G4 727 aa5.86□□□□□ -1.47
PTPN4-204ENST00000431283 CUX1P39880 1505 aa5.85□□□□□ -1.47
PTPN4-204ENST00000431283 IKBKBO14920 756 aa5.85□□□□□ -1.47
PTPN4-204ENST00000431283 OFD1O75665 1012 aa5.85□□□□□ -1.47
PTPN4-204ENST00000431283 PDE6CP51160 858 aa5.85□□□□□ -1.47
PTPN4-204ENST00000431283 SP2Q02086 613 aa5.85□□□□□ -1.47
PTPN4-204ENST00000431283 KLF9Q13886 244 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-204ENST00000431283 BRDTQ58F21 947 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-204ENST00000431283 CEP78Q5JTW2 689 aa5.85□□□□□ -1.47
PTPN4-204ENST00000431283 MIS18BP1Q6P0N0 1132 aa5.85□□□□□ -1.47
PTPN4-204ENST00000431283 BHLHA9Q7RTU4 235 aa5.85□□□□□ -1.47
PTPN4-204ENST00000431283 CYP2W1Q8TAV3 490 aa5.85□□□□□ -1.47
PTPN4-204ENST00000431283 C1GALT1C1Q96EU7 318 aa5.85□□□□□ -1.47
PTPN4-204ENST00000431283 QTRT1Q9BXR0 403 aaKnown RBP5.85□□□□□ -1.47
PTPN4-204ENST00000431283 ZSCAN32Q9NX65 697 aa5.85□□□□□ -1.47
PTPN4-204ENST00000431283 TFCP2L1Q9NZI6 479 aa5.85□□□□□ -1.47
PTPN4-204ENST00000431283 NDRG4Q9ULP0 352 aaKnown RBP5.85□□□□□ -1.47
PTPN4-204ENST00000431283 WRNQ14191 1432 aaPredicted RBP eCLIP5.84□□□□□ -1.47
PTPN4-204ENST00000431283 KCNU1A8MYU2 1149 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 TP73O15350 636 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 IGSF3O75054 1194 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 PRKCBP05771 671 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 IGKV2-30P06310 120 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 THP07101 528 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 NHLRC4P0CG21 123 aaPredicted RBP5.84□□□□□ -1.47
PTPN4-204ENST00000431283 PF4V1P10720 104 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 MGAT5BQ3V5L5 792 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 SUPT20HL1Q3ZLR7 823 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 IFIT1BQ5T764 474 aaKnown RBP5.84□□□□□ -1.47
PTPN4-204ENST00000431283 DEPDC1Q5TB30 811 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 C11orf87Q6NUJ2 197 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 MTHFD1LQ6UB35 978 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 SERPINA13PQ6UXR4 307 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 Q6ZWC4 215 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 Q8N9P0 234 aaPredicted RBP5.84□□□□□ -1.47
PTPN4-204ENST00000431283 OSCP1Q8WVF1 389 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 CGRRF1Q99675 332 aa5.84□□□□□ -1.47
PTPN4-204ENST00000431283 PIH1D1Q9NWS0 290 aaKnown RBP5.84□□□□□ -1.47
PTPN4-204ENST00000431283 ABCA10Q8WWZ4 1543 aa5.84□□□□□ -1.48
PTPN4-204ENST00000431283 UBE2Q2LH0YL09 131 aa5.83□□□□□ -1.48
PTPN4-204ENST00000431283 EXOC3O60645 756 aa5.83□□□□□ -1.48
PTPN4-204ENST00000431283 NEK2P51955 445 aa5.83□□□□□ -1.48
PTPN4-204ENST00000431283 PRKAG1P54619 331 aa5.83□□□□□ -1.48
PTPN4-204ENST00000431283 FGL2Q14314 439 aa5.83□□□□□ -1.48
PTPN4-204ENST00000431283 L1TD1Q5T7N2 865 aaKnown RBP5.83□□□□□ -1.48
PTPN4-204ENST00000431283 PXDC1Q5TGL8 231 aa5.83□□□□□ -1.48
PTPN4-204ENST00000431283 SLC2A7Q6PXP3 512 aa5.83□□□□□ -1.48
PTPN4-204ENST00000431283 CATSPERGQ6ZRH7 1159 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms