RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 DDX43Q9NXZ2 648 aaKnown RBP23.73■■□□□ 1.39
PTPRA-207ENST00000431048 L1RE1Q9UN81 338 aa23.73■■□□□ 1.39
PTPRA-207ENST00000431048 DMXL2Q8TDJ6 3036 aa23.73■■□□□ 1.39
PTPRA-207ENST00000431048 MYO16Q9Y6X6 1858 aa23.73■■□□□ 1.39
PTPRA-207ENST00000431048 UPK3BL1B0FP48 263 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 UPK3BL2E5RIL1 263 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 TNFRSF10BO14763 440 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 ALDH1A2O94788 518 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 HDCP19113 662 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 PDE6CP51160 858 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 MYL7Q01449 175 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 POSTNQ15063 836 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 UAP1L1Q3KQV9 507 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 C2orf27AQ580R0 203 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 SPDYCQ5MJ68 293 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 LRSAM1Q6UWE0 723 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 MDGA1Q8NFP4 955 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 LRRC15Q8TF66 581 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 CALML4Q96GE6 196 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 PCNX2A6NKB5 2137 aa23.72■■□□□ 1.39
PTPRA-207ENST00000431048 ASCC3Q8N3C0 2202 aaKnown RBP23.72■■□□□ 1.39
PTPRA-207ENST00000431048 ANKRD11Q6UB99 2663 aaPredicted RBP23.72■■□□□ 1.39
PTPRA-207ENST00000431048 DSPP15924 2871 aaKnown RBP23.71■■□□□ 1.39
PTPRA-207ENST00000431048 TCHHQ07283 1943 aa23.71■■□□□ 1.39
PTPRA-207ENST00000431048 TISP43B9A030 160 aa23.71■■□□□ 1.39
PTPRA-207ENST00000431048 HUS1O60921 280 aa23.71■■□□□ 1.39
PTPRA-207ENST00000431048 P2RY2P41231 377 aa23.71■■□□□ 1.39
PTPRA-207ENST00000431048 DPP6P42658 865 aa23.71■■□□□ 1.39
PTPRA-207ENST00000431048 MAGEA11P43364 429 aa23.71■■□□□ 1.39
PTPRA-207ENST00000431048 GAB4Q2WGN9 574 aa23.71■■□□□ 1.39
PTPRA-207ENST00000431048 HSF5Q4G112 596 aaPredicted RBP23.71■■□□□ 1.39
PTPRA-207ENST00000431048 LPCAT2Q7L5N7 544 aa23.71■■□□□ 1.39
PTPRA-207ENST00000431048 ZCCHC14Q8WYQ9 949 aaKnown RBP23.71■■□□□ 1.39
PTPRA-207ENST00000431048 CEP295NLQ96MC4 621 aa23.71■■□□□ 1.39
PTPRA-207ENST00000431048 NUSAP1Q9BXS6 441 aaKnown RBP23.71■■□□□ 1.39
PTPRA-207ENST00000431048 GDAP2Q9NXN4 497 aa23.71■■□□□ 1.39
PTPRA-207ENST00000431048 GTF3C4Q9UKN8 822 aa23.71■■□□□ 1.39
PTPRA-207ENST00000431048 MSRB2Q9Y3D2 182 aa23.71■■□□□ 1.39
PTPRA-207ENST00000431048 WDFY3Q8IZQ1 3526 aa23.71■■□□□ 1.39
PTPRA-207ENST00000431048 C2orf78A6NCI8 922 aa23.7■■□□□ 1.38
PTPRA-207ENST00000431048 KRT18P05783 430 aaKnown RBP23.7■■□□□ 1.38
PTPRA-207ENST00000431048 ADSSP30520 456 aa23.7■■□□□ 1.38
PTPRA-207ENST00000431048 UBA7P41226 1012 aa23.7■■□□□ 1.38
PTPRA-207ENST00000431048 DHX8Q14562 1220 aaKnown RBP23.7■■□□□ 1.38
PTPRA-207ENST00000431048 KCNB1Q14721 858 aa23.7■■□□□ 1.38
PTPRA-207ENST00000431048 ZC2HC1CQ53FD0 456 aaPredicted RBP23.7■■□□□ 1.38
PTPRA-207ENST00000431048 TRIM61Q5EBN2 209 aa23.7■■□□□ 1.38
PTPRA-207ENST00000431048 PIP4P1Q86T03 277 aa23.7■■□□□ 1.38
PTPRA-207ENST00000431048 SYT12Q8IV01 421 aa23.7■■□□□ 1.38
PTPRA-207ENST00000431048 LRRC52Q8N7C0 313 aa23.7■■□□□ 1.38
PTPRA-207ENST00000431048 ZHX3Q9H4I2 956 aa23.7■■□□□ 1.38
PTPRA-207ENST00000431048 AGAP1Q9UPQ3 857 aa23.7■■□□□ 1.38
PTPRA-207ENST00000431048 A0A0A0MRY4 1105 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 GABRDO14764 452 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 TBCAO75347 108 aaKnown RBP23.69■■□□□ 1.38
PTPRA-207ENST00000431048 LHX1P48742 406 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 SEC13P55735 322 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 MCM6Q14566 821 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 FAM171BQ6P995 826 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 SLC23A3Q6PIS1 610 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 TMEM92Q6UXU6 159 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 ZNF720Q7Z2F6 126 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 SPATA2LQ8IUW3 424 aaPredicted RBP23.69■■□□□ 1.38
PTPRA-207ENST00000431048 CCDC33Q8N5R6 958 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 TTC16Q8NEE8 873 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 POMGNT1Q8WZA1 660 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 RAD54LQ92698 747 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 HVCN1Q96D96 273 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 SPATA17Q96L03 361 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 FNBP1Q96RU3 617 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 KIF3AQ9Y496 699 aa23.69■■□□□ 1.38
PTPRA-207ENST00000431048 FAM221BA6H8Z2 402 aa23.68■■□□□ 1.38
PTPRA-207ENST00000431048 CHRM1P11229 460 aaPredicted RBP23.68■■□□□ 1.38
PTPRA-207ENST00000431048 HNRNPLP14866 589 aaKnown RBP eCLIP23.68■■□□□ 1.388e-8■■□□□ 13.5
PTPRA-207ENST00000431048 ACAT1P24752 427 aaKnown RBP23.68■■□□□ 1.38
PTPRA-207ENST00000431048 PCSK1P29120 753 aa23.68■■□□□ 1.38
PTPRA-207ENST00000431048 POLR2BP30876 1174 aaKnown RBP23.68■■□□□ 1.38
PTPRA-207ENST00000431048 ZXDBP98169 803 aa23.68■■□□□ 1.38
PTPRA-207ENST00000431048 SEMA3BQ13214 749 aa23.68■■□□□ 1.38
PTPRA-207ENST00000431048 BYSLQ13895 437 aaKnown RBP23.68■■□□□ 1.38
PTPRA-207ENST00000431048 MCTP1Q6DN14 999 aa23.68■■□□□ 1.38
PTPRA-207ENST00000431048 ADGRG2Q8IZP9 1017 aa23.68■■□□□ 1.38
PTPRA-207ENST00000431048 TOP6BLQ8N6T0 577 aa23.68■■□□□ 1.38
PTPRA-207ENST00000431048 C1orf127Q8N9H9 656 aa23.68■■□□□ 1.38
PTPRA-207ENST00000431048 CXorf38Q8TB03 319 aa23.68■■□□□ 1.38
PTPRA-207ENST00000431048 CACTINQ8WUQ7 758 aaKnown RBP23.68■■□□□ 1.38
PTPRA-207ENST00000431048 SPACA7Q96KW9 195 aa23.68■■□□□ 1.38
PTPRA-207ENST00000431048 ANAPC1Q9H1A4 1944 aa23.67■■□□□ 1.38
PTPRA-207ENST00000431048 ANTXRLA6NF34 631 aa23.67■■□□□ 1.38
PTPRA-207ENST00000431048 MYMKA6NI61 221 aa23.67■■□□□ 1.38
PTPRA-207ENST00000431048 HYAL3O43820 417 aaPredicted RBP23.67■■□□□ 1.38
PTPRA-207ENST00000431048 ITGB3P05106 788 aa23.67■■□□□ 1.38
PTPRA-207ENST00000431048 HOXD12P35452 270 aa23.67■■□□□ 1.38
PTPRA-207ENST00000431048 EIF2DP41214 584 aaKnown RBP23.67■■□□□ 1.38
PTPRA-207ENST00000431048 RING1Q06587 406 aa23.67■■□□□ 1.38
PTPRA-207ENST00000431048 PEAR1Q5VY43 1037 aaPredicted RBP23.67■■□□□ 1.38
PTPRA-207ENST00000431048 LMBRD2Q68DH5 695 aaPredicted RBP23.67■■□□□ 1.38
PTPRA-207ENST00000431048 OSTM1Q86WC4 334 aa23.67■■□□□ 1.38
PTPRA-207ENST00000431048 SCN4BQ8IWT1 228 aa23.67■■□□□ 1.38
PTPRA-207ENST00000431048 WHAMMQ8TF30 809 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms