RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 BRD9Q9H8M2 597 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 TBC1D17Q9HA65 648 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 CYP3A43Q9HB55 503 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 TRPV5Q9NQA5 729 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 EHD2Q9NZN4 543 aa10.46□□□□□ -0.73
HDAC6-207ENST00000430858 ATP8B3O60423 1300 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 BICDL2A1A5D9 508 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 ZNF263O14978 683 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 CD44P16070 742 aaKnown RBP10.45□□□□□ -0.74
HDAC6-207ENST00000430858 BMP6P22004 513 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 GDI1P31150 447 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 ASPAP45381 313 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 MXI1P50539 228 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 NDST1P52848 882 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 PTPN5P54829 565 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 DCAF17Q5H9S7 520 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-207ENST00000430858 TCERG1LQ5VWI1 586 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 SPOPLQ6IQ16 392 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 DENND5BQ6ZUT9 1274 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 FILIP1Q7Z7B0 1213 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 YAF2Q8IY57 180 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 CMTM8Q8IZV2 173 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 STKLD1Q8NE28 680 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 FBXL13Q8NEE6 735 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 ELMO3Q96BJ8 720 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 FAM122AQ96E09 287 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 SLC46A2Q9BY10 475 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 B3GNT5Q9BYG0 378 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 BCO2Q9BYV7 579 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 NIF3L1Q9GZT8 377 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 IRF2BPLQ9H1B7 796 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 APOBEC3GQ9HC16 384 aaKnown RBP10.45□□□□□ -0.74
HDAC6-207ENST00000430858 METTL14Q9HCE5 456 aaKnown RBP10.45□□□□□ -0.74
HDAC6-207ENST00000430858 RAB20Q9NX57 234 aa10.45□□□□□ -0.74
HDAC6-207ENST00000430858 ARMCX3Q9UH62 379 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-207ENST00000430858 NCANO14594 1321 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 KANSL1LA0AUZ9 987 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 PPP1R3GB7ZBB8 358 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 F8VP50 259 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 BIN1O00499 593 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 CLDN5O00501 218 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 CHADO15335 359 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 GALR2O43603 387 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-207ENST00000430858 PI15O43692 258 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 TADA3O75528 432 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 AVPR1AP37288 418 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 PLA2G5P39877 138 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 PPP3CCP48454 512 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 FCHO2Q0JRZ9 810 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 INCA1Q0VD86 236 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 WDR44Q5JSH3 913 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 KLHL10Q6JEL2 608 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 TTI2Q6NXR4 508 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 CLEC17AQ6ZS10 378 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 FRMD5Q7Z6J6 570 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 ACOT1Q86TX2 421 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 MON1AQ86VX9 555 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 CRYBG2Q8N1P7 616 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 CELF5Q8N6W0 485 aaKnown RBP10.44□□□□□ -0.74
HDAC6-207ENST00000430858 MAB21L3Q8N8X9 362 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 PRSS33Q8NF86 280 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 BPIFB1Q8TDL5 484 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 NELFBQ8WX92 580 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 DDX23Q9BUQ8 820 aaKnown RBP10.44□□□□□ -0.74
HDAC6-207ENST00000430858 TTLL2Q9BWV7 592 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 OSBPL6Q9BZF3 934 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 ZNF518BQ9C0D4 1074 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 DNAI2Q9GZS0 605 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 KIF9Q9HAQ2 790 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.44□□□□□ -0.74
HDAC6-207ENST00000430858 KIAA1468Q9P260 1216 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 SIT1Q9Y3P8 196 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 ZNF318Q5VUA4 2279 aa10.44□□□□□ -0.74
HDAC6-207ENST00000430858 ZDBF2Q9HCK1 2354 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 ARNTLO00327 626 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 MAN2B1O00754 1011 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 CILPO75339 1184 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 PRAMEF12O95522 483 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 GNA14O95837 355 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 GLULP15104 373 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 PFKLP17858 780 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 MLLT6P55198 1093 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-207ENST00000430858 PLCB2Q00722 1185 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 TCF15Q12870 199 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 PAK1Q13153 545 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 ZNF268Q14587 947 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-207ENST00000430858 CAMK4Q16566 473 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 CBWD6Q4V339 395 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 ARHGAP29Q52LW3 1261 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 CBWD3Q5JTY5 395 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 CBWD5Q5RIA9 395 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 TXNDC8Q6A555 127 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 ZNF852Q6ZMS4 543 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 TPRG1Q6ZUI0 275 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 PAQR9Q6ZVX9 377 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 FAM35AQ86V20 835 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 CCDC105Q8IYK2 499 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 TTC39CQ8N584 583 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 PJA1Q8NG27 643 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 SEMA4DQ92854 862 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms