RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 GOLGA6L22H0YM25 854 aa18.54■□□□□ 0.56
CTSD-203ENST00000429746 NARSO43776 548 aaKnown RBP18.54■□□□□ 0.56
CTSD-203ENST00000429746 GNA14O95837 355 aa18.54■□□□□ 0.56
CTSD-203ENST00000429746 USP46P62068 366 aa18.54■□□□□ 0.56
CTSD-203ENST00000429746 TDGQ13569 410 aa18.54■□□□□ 0.56
CTSD-203ENST00000429746 MAPRE1Q15691 268 aaKnown RBP18.54■□□□□ 0.56
CTSD-203ENST00000429746 FAM78AQ5JUQ0 283 aa18.54■□□□□ 0.56
CTSD-203ENST00000429746 C4orf50Q6ZRC1 276 aa18.54■□□□□ 0.56
CTSD-203ENST00000429746 C11orf57Q6ZUT1 292 aaPredicted RBP18.54■□□□□ 0.56
CTSD-203ENST00000429746 FAM35AQ86V20 835 aa18.54■□□□□ 0.56
CTSD-203ENST00000429746 ELMOD1Q8N336 334 aa18.54■□□□□ 0.56
CTSD-203ENST00000429746 TRMT2BQ96GJ1 504 aaKnown RBP18.54■□□□□ 0.56
CTSD-203ENST00000429746 SPATA17Q96L03 361 aa18.54■□□□□ 0.56
CTSD-203ENST00000429746 ASB16Q96NS5 453 aa18.54■□□□□ 0.56
CTSD-203ENST00000429746 PLA2G2FQ9BZM2 168 aa18.54■□□□□ 0.56
CTSD-203ENST00000429746 WDFY4Q6ZS81 3184 aa18.54■□□□□ 0.56
CTSD-203ENST00000429746 SLC38A8A6NNN8 435 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 F8VP50 259 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 ZNF197O14709 1029 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 P4HA2O15460 535 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 BEST1O76090 585 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 P4HA1P13674 534 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 CCDC130P13994 396 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 ACO1P21399 889 aaKnown RBP18.53■□□□□ 0.56
CTSD-203ENST00000429746 GABRR2P28476 465 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 CYP27A1Q02318 531 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 CYP4A22Q5TCH4 519 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 TANGO2Q6ICL3 276 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 DPY19L2P1Q6NXN4 242 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 ITIH5Q86UX2 942 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 KAT5Q92993 513 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 C8orf48Q96LL4 319 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 IMPG2Q9BZV3 1241 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 TRPV4Q9HBA0 871 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 CISHQ9NSE2 258 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 DUSP12Q9UNI6 340 aa18.53■□□□□ 0.56
CTSD-203ENST00000429746 MYH10P35580 1976 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 TNFRSF10BO14763 440 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 CD58P19256 250 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 AVPR2P30518 371 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 RAD23BP54727 409 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 PTPN5P54829 565 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 RPL10AP62906 217 aaKnown RBP18.52■□□□□ 0.56
CTSD-203ENST00000429746 CYP4F8P98187 520 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 NHLH1Q02575 133 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 CUL2Q13617 745 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 CT47A1Q5JQC4 288 aaPredicted RBP18.52■□□□□ 0.56
CTSD-203ENST00000429746 MIIPQ5JXC2 388 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 CCDC183Q5T5S1 534 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 IER5LQ5T953 404 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 ARHGEF19Q8IW93 802 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 SLC4A11Q8NBS3 891 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 LRRC3BQ96PB8 259 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 SMOQ99835 787 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 TTLL2Q9BWV7 592 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 THAP9Q9H5L6 903 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 CSNK1G1Q9HCP0 422 aa18.52■□□□□ 0.56
CTSD-203ENST00000429746 SAMSN1Q9NSI8 373 aaKnown RBP18.52■□□□□ 0.56
CTSD-203ENST00000429746 AFPP02771 609 aaKnown RBP18.51■□□□□ 0.55
CTSD-203ENST00000429746 CSH1P0DML2 217 aa18.51■□□□□ 0.55
CTSD-203ENST00000429746 CSH2P0DML3 217 aa18.51■□□□□ 0.55
CTSD-203ENST00000429746 SCN4BQ8IWT1 228 aa18.51■□□□□ 0.55
CTSD-203ENST00000429746 EHBP1Q8NDI1 1231 aa18.51■□□□□ 0.55
CTSD-203ENST00000429746 SLC2A14Q8TDB8 520 aa18.51■□□□□ 0.55
CTSD-203ENST00000429746 TNIP3Q96KP6 325 aa18.51■□□□□ 0.55
CTSD-203ENST00000429746 CEP295NLQ96MC4 621 aa18.51■□□□□ 0.55
CTSD-203ENST00000429746 KCNK16Q96T55 309 aa18.51■□□□□ 0.55
CTSD-203ENST00000429746 KXD1Q9BQD3 176 aa18.51■□□□□ 0.55
CTSD-203ENST00000429746 HSD3B7Q9H2F3 369 aa18.51■□□□□ 0.55
CTSD-203ENST00000429746 FAM124BQ9H5Z6 455 aaPredicted RBP18.51■□□□□ 0.55
CTSD-203ENST00000429746 FAM49BQ9NUQ9 324 aa18.51■□□□□ 0.55
CTSD-203ENST00000429746 IL37Q9NZH6 218 aa18.51■□□□□ 0.55
CTSD-203ENST00000429746 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.51■□□□□ 0.55
CTSD-203ENST00000429746 HELZP42694 1942 aaKnown RBP18.51■□□□□ 0.55
CTSD-203ENST00000429746 HHLA1C9JL84 531 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 ECI2O75521 394 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 PRAMEF12O95522 483 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 CCDC192P0DO97 292 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 WEE1P30291 646 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 LRMPQ12912 555 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 VEPH1Q14D04 833 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 CDKAL1Q5VV42 579 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 PHLDB3Q6NSJ2 640 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 RIN3Q8TB24 985 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 SMARCD2Q92925 531 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 KREMEN1Q96MU8 473 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 HNRNPABQ99729 332 aaKnown RBP18.5■□□□□ 0.55
CTSD-203ENST00000429746 NT5C1AQ9BXI3 368 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 SLC46A2Q9BY10 475 aa18.5■□□□□ 0.55
CTSD-203ENST00000429746 FAM92AA1XBS5 289 aa18.49■□□□□ 0.55
CTSD-203ENST00000429746 SHISA7A6NL88 538 aa18.49■□□□□ 0.55
CTSD-203ENST00000429746 PDGFBP01127 241 aaPredicted RBP18.49■□□□□ 0.55
CTSD-203ENST00000429746 GRIK1P39086 918 aa18.49■□□□□ 0.55
CTSD-203ENST00000429746 VIPR2P41587 438 aa18.49■□□□□ 0.55
CTSD-203ENST00000429746 CLCN5P51795 746 aa18.49■□□□□ 0.55
CTSD-203ENST00000429746 APBA1Q02410 837 aa18.49■□□□□ 0.55
CTSD-203ENST00000429746 NCAPHQ15003 741 aa18.49■□□□□ 0.55
CTSD-203ENST00000429746 PPP1R26Q5T8A7 1209 aaPredicted RBP18.49■□□□□ 0.55
CTSD-203ENST00000429746 VITQ6UXI7 678 aa18.49■□□□□ 0.55
CTSD-203ENST00000429746 CLEC20AQ6ZU45 233 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms