RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	CYP2J2	P51589	502 aa		18.99	■□□□□ 0.63
MRPL28-203	ENST00000429738	KPNA1	P52294	538 aa	Predicted RBP	18.99	■□□□□ 0.63
MRPL28-203	ENST00000429738	NLRP12	P59046	1061 aa		18.99	■□□□□ 0.63
MRPL28-203	ENST00000429738	STK4	Q13043	487 aa		18.99	■□□□□ 0.63
MRPL28-203	ENST00000429738	DGKK	Q5KSL6	1271 aa		18.99	■□□□□ 0.63
MRPL28-203	ENST00000429738	GPIHBP1	Q8IV16	184 aa		18.99	■□□□□ 0.63
MRPL28-203	ENST00000429738	TMEM174	Q8WUU8	243 aa		18.99	■□□□□ 0.63
MRPL28-203	ENST00000429738	ZNF516	Q92618	1163 aa		18.99	■□□□□ 0.63
MRPL28-203	ENST00000429738	CHAMP1	Q96JM3	812 aa		18.99	■□□□□ 0.63
MRPL28-203	ENST00000429738	GCNA	Q96QF7	691 aa		18.99	■□□□□ 0.63
MRPL28-203	ENST00000429738	FNBP1	Q96RU3	617 aa		18.99	■□□□□ 0.63
MRPL28-203	ENST00000429738	RBM12	Q9NTZ6	932 aa	Known RBP	18.99	■□□□□ 0.63
MRPL28-203	ENST00000429738	R3HCC1	Q9Y3T6	440 aa	Known RBP	18.99	■□□□□ 0.63
MRPL28-203	ENST00000429738	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	FAM237A	A0A1B0GTK4	181 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	SOBP	A7XYQ1	873 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738		K7ESF4	209 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	NOL4	O94818	638 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	TNNI1	P19237	187 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	WARS	P23381	471 aa	Known RBP	18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	LMO2	P25791	158 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	RPL10A	P62906	217 aa	Known RBP	18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	KRT85	P78386	507 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	SRSF5	Q13243	272 aa	Known RBP	18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	TAF12	Q16514	161 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	DDR2	Q16832	855 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	ARHGAP29	Q52LW3	1261 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	SDHAF4	Q5VUM1	108 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	CMTM8	Q8IZV2	173 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	STKLD1	Q8NE28	680 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	TRMT2B	Q96GJ1	504 aa	Known RBP	18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	SPATA32	Q96LK8	384 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	MYRFL	Q96LU7	910 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	USP25	Q9UHP3	1055 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	CDH9	Q9ULB4	789 aa		18.98	■□□□□ 0.63
MRPL28-203	ENST00000429738	USP24	Q9UPU5	2620 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	SLC38A8	A6NNN8	435 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	DPYSL4	O14531	572 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	GDF9	O60383	454 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	ATP2C2	O75185	946 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	TADA3	O75528	432 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	STAU1	O95793	577 aa	Known RBP	18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	MYL1	P05976	194 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	FAM163B	P0C2L3	166 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	DDX6	P26196	483 aa	Known RBP eCLIP	18.97	■□□□□ 0.63	2e-7	■■■□□ 16.6
MRPL28-203	ENST00000429738	HOXA6	P31267	233 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	MAGEA11	P43364	429 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	SOX9	P48436	509 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	PSMD2	Q13200	908 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	KMT5B	Q4FZB7	885 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	HEATR6	Q6AI08	1181 aa	Known RBP	18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	RALGPS2	Q86X27	583 aa	Predicted RBP	18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	SPATA2L	Q8IUW3	424 aa	Predicted RBP	18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	GOLGA5	Q8TBA6	731 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	PLEKHO2	Q8TD55	490 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	BPIFB1	Q8TDL5	484 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	DDX1	Q92499	740 aa	Known RBP	18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	CCDC127	Q96BQ5	260 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	SYT15	Q9BQS2	421 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	KCTD10	Q9H3F6	313 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	CRTAC1	Q9NQ79	661 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	DMAC2	Q9NW81	257 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	NME7	Q9Y5B8	376 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	CACNA1G	O43497	2377 aa		18.97	■□□□□ 0.63
MRPL28-203	ENST00000429738	SPECC1L-ADORA2A	F8WAN1	911 aa		18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738	TACC1	O75410	805 aa		18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738	CLDN10	P78369	228 aa		18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738	PLCB2	Q00722	1185 aa		18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738	WDR44	Q5JSH3	913 aa		18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738		Q6ZS52	159 aa		18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738	SLC9A9	Q8IVB4	645 aa		18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738	FAM160A2	Q8N612	972 aa	Predicted RBP	18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738	ZFYVE19	Q96K21	471 aa		18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738	SMG9	Q9H0W8	520 aa	Known RBP	18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738	EXOC1	Q9NV70	894 aa		18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738	UXT	Q9UBK9	157 aa	Predicted RBP	18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738	CHD6	Q8TD26	2715 aa		18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738	SPAG17	Q6Q759	2223 aa		18.96	■□□□□ 0.63
MRPL28-203	ENST00000429738	EXOC3	O60645	756 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	CTH	P32929	405 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	PSMC1	P62191	440 aa	Known RBP	18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	MAPRE1	Q15691	268 aa	Known RBP	18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	TXNDC8	Q6A555	127 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	TXNDC11	Q6PKC3	985 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	C4orf50	Q6ZRC1	276 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	CEP68	Q76N32	757 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	MON1A	Q86VX9	555 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	SYNPO	Q8N3V7	929 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	MAB21L3	Q8N8X9	362 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	PARD3B	Q8TEW8	1205 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	USP13	Q92995	863 aa	Predicted RBP	18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	MYLPF	Q96A32	169 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	MMS19	Q96T76	1030 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	MRPL45	Q9BRJ2	306 aa	Known RBP	18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	XYLT2	Q9H1B5	865 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	VRTN	Q9H8Y1	702 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	C2orf42	Q9NWW7	574 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	GTSE1	Q9NYZ3	720 aa		18.95	■□□□□ 0.62
MRPL28-203	ENST00000429738	MAGED2	Q9UNF1	606 aa	Predicted RBP	18.95	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms