RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ACSL3O95573 720 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 PCP11498 1178 aaKnown RBP9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 CCDC130P13994 396 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 GLULP15104 373 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 UGT1A6P19224 532 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 POLR2CP19387 275 aaPredicted RBP9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 UGT1A1P22309 533 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 UGT1A4P22310 534 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 UGT1A3P35503 534 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 UGT1A5P35504 534 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 PRKCIP41743 596 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 SCNN1DP51172 638 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 P2RX3P56373 397 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 GNG2P59768 71 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 KLHL30Q0D2K2 578 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 DLGAP5Q15398 846 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 SLC15A2Q16348 729 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 NFE2Q16621 373 aaPredicted RBP9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 EFHC1Q5JVL4 640 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 CADM3Q8N126 398 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 GALNT4Q8N4A0 578 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 TRIML2Q8N7C3 387 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 CCDC89Q8N998 374 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 RBM15BQ8NDT2 890 aaKnown RBP9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 CATSPER1Q8NEC5 780 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 IGDCC4Q8TDY8 1250 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 GOLPH3Q9H4A6 298 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 RNF41Q9H4P4 317 aaPredicted RBP9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 UGT1A7Q9HAW7 530 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 UGT1A10Q9HAW8 530 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 UGT1A8Q9HAW9 530 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 LRRC4BQ9NT99 713 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 KCNN3Q9UGI6 736 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 DENND2AQ9ULE3 1009 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 SCAF8Q9UPN6 1271 aaKnown RBP9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 ATP11BQ9Y2G3 1177 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 COL4A1P02462 1669 aa9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 AHDC1Q5TGY3 1603 aaPredicted RBP9.26□□□□□ -0.93
CDC42BPA-206ENST00000429440 ILVBLA1L0T0 632 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 FADS2P1A8MWK0 482 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 CFAP99D6REC4 459 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 UBE2Q2LH0YL09 131 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 AREL1O15033 823 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 SGTAO43765 313 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 KCNJ13O60928 360 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 B3GALNT1O75752 331 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 C19orf57Q0VDD7 668 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 SELENBP1Q13228 472 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 PTGDRQ13258 359 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 CENPPQ6IPU0 288 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 EEPD1Q7L9B9 569 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 TRABD2AQ86V40 505 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 ZNF34Q8IZ26 560 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 RNF169Q8NCN4 708 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 TSPAN14Q8NG11 270 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 RASSF5Q8WWW0 418 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 CDHR1Q96JP9 859 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 ZNF512BQ96KM6 892 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 CIB1Q99828 191 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 THTPAQ9BU02 230 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 NAPBQ9H115 298 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 ERVK-5Q9HDB9 667 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 C12orf4Q9NQ89 552 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 DDX56Q9NY93 547 aaKnown RBP9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 TBC1D14Q9P2M4 693 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 PCSK1NQ9UHG2 260 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 ATPIF1Q9UII2 106 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 FAM172BPA6NC97 362 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 IRS4O14654 1257 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 ATMINO43313 823 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 FOXD2O60548 495 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 CRTAMO95727 393 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 GGPS1O95749 300 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 CXCR2P25025 360 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 CIITAP33076 1130 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 IREB2P48200 963 aaKnown RBP9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 CLK3P49761 638 aaKnown RBP9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 PPP2R2BQ00005 443 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 CALCOCO2Q13137 446 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 TBCCQ15814 346 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 GRAMD1BQ3KR37 738 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 ARL6IP4Q66PJ3 421 aaKnown RBP9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 IYDQ6PHW0 289 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 FOXR2Q6PJQ5 311 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 LDHAL6AQ6ZMR3 332 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 PSPC1Q8WXF1 523 aaKnown RBP9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 FANCEQ9HB96 536 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 AAASQ9NRG9 546 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 KBTBD4Q9NVX7 518 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 WHRNQ9P202 907 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 NOSIPQ9Y314 301 aaKnown RBP9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 AP4B1Q9Y6B7 739 aa9.25□□□□□ -0.93
CDC42BPA-206ENST00000429440 CICQ96RK0 1608 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 LINC00854A0A1B0GVQ3 168 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 CAPN14A8MX76 684 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 FOXO6A8MYZ6 492 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 H3BRJ5 948 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 DDX3YO15523 660 aaKnown RBP9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 CCNT2O60583 730 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms