RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 DERAQ9Y315 318 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 GOLGA6L7A0A1B0GV03 622 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 SMAPO00193 183 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 CSDE1O75534 798 aaKnown RBP14.38□□□□□ -0.11
THBS3-202ENST00000428962 FSBPO95073 299 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 MMP3P08254 477 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 HOXD8P13378 290 aaPredicted RBP14.38□□□□□ -0.11
THBS3-202ENST00000428962 KDELR1P24390 212 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 PCK1P35558 622 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 GPD2P43304 727 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 CDC42EP1Q00587 391 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 ORC1Q13415 861 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 DGKDQ16760 1214 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 CENPUQ71F23 418 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 ANKRD23Q86SG2 305 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 CCDC197Q8NCU1 140 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 HAUS1Q96CS2 278 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 KIF12Q96FN5 646 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 PRMT1Q99873 361 aaKnown RBP14.38□□□□□ -0.11
THBS3-202ENST00000428962 NT5C1AQ9BXI3 368 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 PLEKHA5Q9HAU0 1116 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 TJP2Q9UDY2 1190 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 CCL15-CCL14A0A0B4J2E2 113 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 TMEM120BA0PK00 339 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 RRN3P2A6NIE6 340 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 TMEM88BA6NKF7 163 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 CST8O60676 142 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 PECAM1P16284 738 aaPredicted RBP14.37□□□□□ -0.11
THBS3-202ENST00000428962 DESP17661 470 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 NDST1P52848 882 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 OTUD4Q01804 1114 aaKnown RBP14.37□□□□□ -0.11
THBS3-202ENST00000428962 CCL15Q16663 113 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 RALGAPA2Q2PPJ7 1873 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 SMTNL2Q2TAL5 461 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 DUSP28Q4G0W2 176 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 FAM102AQ5T9C2 384 aaPredicted RBP14.37□□□□□ -0.11
THBS3-202ENST00000428962 RNASEH2BQ5TBB1 312 aaKnown RBP14.37□□□□□ -0.11
THBS3-202ENST00000428962 LCLAT1Q6UWP7 414 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 DPP9Q86TI2 863 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 KCTD6Q8NC69 237 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 OR6J1Q8NGC5 347 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 C9orf72Q96LT7 481 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 PWWP2AQ96N64 755 aa14.37□□□□□ -0.11
THBS3-202ENST00000428962 BTBD19C9JJ37 291 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 SNAI1O95863 264 aaPredicted RBP14.36□□□□□ -0.11
THBS3-202ENST00000428962 IFNB1P01574 187 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 ZSCAN5DPP0CG00 497 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 GPD1P21695 349 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 IL1R2P27930 398 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 ZNF143P52747 638 aaPredicted RBP14.36□□□□□ -0.11
THBS3-202ENST00000428962 SNX16P57768 344 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 DYNLT1P63172 113 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 GRB14Q14449 540 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 ITIH4Q14624 930 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 PCBP1Q15365 356 aaKnown RBP eCLIP14.36□□□□□ -0.11
THBS3-202ENST00000428962 CYP4F22Q6NT55 531 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 PRUNE1Q86TP1 453 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 RFX6Q8HWS3 928 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 ARFGAP1Q8N6T3 406 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 EMC1Q8N766 993 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 CMASQ8NFW8 434 aaPredicted RBP14.36□□□□□ -0.11
THBS3-202ENST00000428962 ACTL9Q8TC94 416 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 RSAD2Q8WXG1 361 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 CNPY3Q9BT09 278 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 TMEM121Q9BTD3 319 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 ABHD16BQ9H3Z7 469 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 RSAD1Q9HA92 442 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 CTNNAL1Q9UBT7 734 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 USP18Q9UMW8 372 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 EXOC1LA0A1B0GW35 172 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 APOC4-APOC2K7ER74 178 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 MCF2LO15068 1137 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 TRUB2O95900 331 aaKnown RBP14.36□□□□□ -0.11
THBS3-202ENST00000428962 APOC2P02655 101 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 VIMP08670 466 aaKnown RBP14.36□□□□□ -0.11
THBS3-202ENST00000428962 SETSIPP0DME0 302 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 BRAFP15056 766 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 MIPP30301 263 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 YARSP54577 528 aaKnown RBP14.36□□□□□ -0.11
THBS3-202ENST00000428962 VSTM1Q6UX27 236 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 PPP1R21Q6ZMI0 780 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 ARHGEF18Q6ZSZ5 1173 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 GPR142Q7Z601 462 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 TDRPQ86YL5 185 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 PPIL6Q8IXY8 311 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 CCDC13Q8IYE1 715 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 KIAA0319LQ8IZA0 1049 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 GLIS1Q8NBF1 620 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 PRCCQ92733 491 aaPredicted RBP14.36□□□□□ -0.11
THBS3-202ENST00000428962 GCOM2Q9BZD3 368 aaPredicted RBP14.36□□□□□ -0.11
THBS3-202ENST00000428962 KCNK9Q9NPC2 374 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 NKIRAS1Q9NYS0 192 aa14.36□□□□□ -0.11
THBS3-202ENST00000428962 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.35□□□□□ -0.11
THBS3-202ENST00000428962 H0YHG0 523 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 ETS1P14921 441 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 SMPD1P17405 629 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 IFNAR2P48551 515 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 PDE4CQ08493 712 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 FAM47CQ5HY64 1035 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms