RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 GANQ9H2C0 597 aa23.7■■□□□ 1.38
PTPN18-205ENST00000428843 TMEM30AQ9NV96 361 aa23.7■■□□□ 1.38
PTPN18-205ENST00000428843 ASB3Q9Y575 518 aa23.7■■□□□ 1.38
PTPN18-205ENST00000428843 NOL4O94818 638 aa23.69■■□□□ 1.38
PTPN18-205ENST00000428843 PAEPP09466 180 aa23.69■■□□□ 1.38
PTPN18-205ENST00000428843 KRT5P13647 590 aa23.69■■□□□ 1.38
PTPN18-205ENST00000428843 UCHL3P15374 230 aa23.69■■□□□ 1.38
PTPN18-205ENST00000428843 PTPN2P17706 415 aa23.69■■□□□ 1.38
PTPN18-205ENST00000428843 ADORA2BP29275 332 aa23.69■■□□□ 1.38
PTPN18-205ENST00000428843 ZNF132P52740 706 aa23.69■■□□□ 1.38
PTPN18-205ENST00000428843 VEPH1Q14D04 833 aa23.69■■□□□ 1.38
PTPN18-205ENST00000428843 STKLD1Q8NE28 680 aa23.69■■□□□ 1.38
PTPN18-205ENST00000428843 SHC3Q92529 594 aa23.69■■□□□ 1.38
PTPN18-205ENST00000428843 SMARCD1Q96GM5 515 aa23.69■■□□□ 1.38
PTPN18-205ENST00000428843 CORO1BQ9BR76 489 aa23.69■■□□□ 1.38
PTPN18-205ENST00000428843 NAA15Q9BXJ9 866 aaKnown RBP23.69■■□□□ 1.38
PTPN18-205ENST00000428843 WDR6Q9NNW5 1121 aaKnown RBP23.69■■□□□ 1.38
PTPN18-205ENST00000428843 FAM207AQ9NSI2 230 aaPredicted RBP23.69■■□□□ 1.38
PTPN18-205ENST00000428843 CLUHO75153 1309 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 TRIM66O15016 1216 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 EPHB6O15197 1021 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 AP1G2O75843 785 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 RHOP08100 348 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 CD19P15391 556 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 RFX1P22670 979 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 RAPGEF1Q13905 1077 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 ARHGAP17Q68EM7 881 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 DNAJB7Q7Z6W7 309 aaPredicted RBP23.68■■□□□ 1.38
PTPN18-205ENST00000428843 ITIH5Q86UX2 942 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 HS6ST3Q8IZP7 471 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 PSMG2Q969U7 264 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 KRT82Q9NSB4 513 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 TCF20Q9UGU0 1960 aaKnown RBP23.68■■□□□ 1.38
PTPN18-205ENST00000428843 GREB1Q4ZG55 1949 aa23.68■■□□□ 1.38
PTPN18-205ENST00000428843 F8VP50 259 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 CALCAP01258 141 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 VDRP11473 427 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 BMP1P13497 986 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 ANXA13P27216 316 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 USP8P40818 1118 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 UBASH3AP57075 661 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 DRAP1Q14919 205 aaPredicted RBP23.67■■□□□ 1.38
PTPN18-205ENST00000428843 NR1I3Q14994 352 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 PTPN21Q16825 1174 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 PABPC1LQ4VXU2 614 aaKnown RBP23.67■■□□□ 1.38
PTPN18-205ENST00000428843 SGO2Q562F6 1265 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 NEK11Q8NG66 645 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 SPATA17Q96L03 361 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 C8orf48Q96LL4 319 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 SMOQ99835 787 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 GPR88Q9GZN0 384 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 KIAA1257Q9ULG3 409 aa23.67■■□□□ 1.38
PTPN18-205ENST00000428843 SLC38A8A6NNN8 435 aa23.66■■□□□ 1.38
PTPN18-205ENST00000428843 FOXN3O00409 490 aaPredicted RBP23.66■■□□□ 1.38
PTPN18-205ENST00000428843 BEST1O76090 585 aa23.66■■□□□ 1.38
PTPN18-205ENST00000428843 FAM200BP0CF97 657 aa23.66■■□□□ 1.38
PTPN18-205ENST00000428843 PNMA6AP0CW24 399 aaPredicted RBP23.66■■□□□ 1.38
PTPN18-205ENST00000428843 POLR2FP61218 127 aaKnown RBP23.66■■□□□ 1.38
PTPN18-205ENST00000428843 MTMR3Q13615 1198 aa23.66■■□□□ 1.38
PTPN18-205ENST00000428843 TMC8Q8IU68 726 aa23.66■■□□□ 1.38
PTPN18-205ENST00000428843 TFAP2BQ92481 460 aa23.66■■□□□ 1.38
PTPN18-205ENST00000428843 KCNK16Q96T55 309 aa23.66■■□□□ 1.38
PTPN18-205ENST00000428843 PHF7Q9BWX1 381 aaPredicted RBP23.66■■□□□ 1.38
PTPN18-205ENST00000428843 LRRC3Q9BY71 257 aa23.66■■□□□ 1.38
PTPN18-205ENST00000428843 ZNF334Q9HCZ1 680 aaPredicted RBP23.66■■□□□ 1.38
PTPN18-205ENST00000428843 DMAP1Q9NPF5 467 aaPredicted RBP23.66■■□□□ 1.38
PTPN18-205ENST00000428843 ASAH2Q9NR71 780 aa23.66■■□□□ 1.38
PTPN18-205ENST00000428843 CSH1P0DML2 217 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 CSH2P0DML3 217 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 FSHRP23945 695 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 BRD2P25440 801 aaKnown RBP23.65■■□□□ 1.38
PTPN18-205ENST00000428843 MAP3K7CLP57077 242 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 TAF12Q16514 161 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 GOLGA7BQ2TAP0 167 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 SMYD5Q6GMV2 418 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 GAS2L3Q86XJ1 694 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 ZMIZ2Q8NF64 920 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 CEP295NLQ96MC4 621 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 ZSWIM1Q9BR11 485 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 STK33Q9BYT3 514 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 CSNK1G1Q9HCP0 422 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 AVENQ9NQS1 362 aaPredicted RBP23.65■■□□□ 1.38
PTPN18-205ENST00000428843 IFNKQ9P0W0 207 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 DAAM1Q9Y4D1 1078 aa23.65■■□□□ 1.38
PTPN18-205ENST00000428843 PATJQ8NI35 1801 aa23.64■■□□□ 1.38
PTPN18-205ENST00000428843 A0A1W2PQC6 194 aa23.64■■□□□ 1.37
PTPN18-205ENST00000428843 O00370 1275 aa23.64■■□□□ 1.37
PTPN18-205ENST00000428843 MYL4P12829 197 aa23.64■■□□□ 1.37
PTPN18-205ENST00000428843 HMGA1P17096 107 aaKnown RBP23.64■■□□□ 1.37
PTPN18-205ENST00000428843 EPHA5P54756 1037 aa23.64■■□□□ 1.37
PTPN18-205ENST00000428843 SLC5A9Q2M3M2 681 aa23.64■■□□□ 1.37
PTPN18-205ENST00000428843 CYP4A22Q5TCH4 519 aa23.64■■□□□ 1.37
PTPN18-205ENST00000428843 CLEC20AQ6ZU45 233 aa23.64■■□□□ 1.37
PTPN18-205ENST00000428843 PDZD4Q76G19 769 aaPredicted RBP23.64■■□□□ 1.37
PTPN18-205ENST00000428843 FAM71AQ8IYT1 594 aa23.64■■□□□ 1.37
PTPN18-205ENST00000428843 ITFG1Q8TB96 612 aa23.64■■□□□ 1.37
PTPN18-205ENST00000428843 DUSP16Q9BY84 665 aa23.64■■□□□ 1.37
PTPN18-205ENST00000428843 RBSNQ9H1K0 784 aa23.64■■□□□ 1.37
PTPN18-205ENST00000428843 ACP6Q9NPH0 428 aa23.64■■□□□ 1.37
PTPN18-205ENST00000428843 NLRC4Q9NPP4 1024 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms