RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 TAZQ16635 292 aa15□□□□□ -0.01
LIG1-202ENST00000427526 DUOXA2Q1HG44 320 aa15□□□□□ -0.01
LIG1-202ENST00000427526 ZC3H12AQ5D1E8 599 aaKnown RBP15□□□□□ -0.01
LIG1-202ENST00000427526 CAPN12Q6ZSI9 719 aa15□□□□□ -0.01
LIG1-202ENST00000427526 PCGF5Q86SE9 256 aa15□□□□□ -0.01
LIG1-202ENST00000427526 ZBTB33Q86T24 672 aa15□□□□□ -0.01
LIG1-202ENST00000427526 SPATA33Q96N06 139 aa15□□□□□ -0.01
LIG1-202ENST00000427526 MAK16Q9BXY0 300 aaKnown RBP15□□□□□ -0.01
LIG1-202ENST00000427526 PHACTR1Q9C0D0 580 aa15□□□□□ -0.01
LIG1-202ENST00000427526 ZMYND8Q9ULU4 1186 aaPredicted RBP15□□□□□ -0.01
LIG1-202ENST00000427526 CHKBQ9Y259 395 aa15□□□□□ -0.01
LIG1-202ENST00000427526 HGSO14964 777 aaPredicted RBP14.99□□□□□ -0.01
LIG1-202ENST00000427526 BANF1O75531 89 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 ANP32DO95626 131 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 IFNB1P01574 187 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 CCND1P24385 295 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 ASPAP45381 313 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 GDF10P55107 478 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 GAD2Q05329 585 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 HIF1AQ16665 826 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 CCDC62Q6P9F0 684 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 KIAA0319LQ8IZA0 1049 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 UTP4Q969X6 686 aaKnown RBP14.99□□□□□ -0.01
LIG1-202ENST00000427526 ZBTB10Q96DT7 871 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 MPHOSPH6Q99547 160 aaKnown RBP14.99□□□□□ -0.01
LIG1-202ENST00000427526 ACO2Q99798 780 aaKnown RBP14.99□□□□□ -0.01
LIG1-202ENST00000427526 XYLT2Q9H1B5 865 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 SSU72Q9NP77 194 aaKnown RBP14.99□□□□□ -0.01
LIG1-202ENST00000427526 PSMC3IPQ9P2W1 217 aaPredicted RBP14.99□□□□□ -0.01
LIG1-202ENST00000427526 CPSF3Q9UKF6 684 aaKnown RBP14.99□□□□□ -0.01
LIG1-202ENST00000427526 USH1CQ9Y6N9 552 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 IQCA1LA6NCM1 817 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 SIGLEC16A6NMB1 481 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 PPP1R12AO14974 1030 aaPredicted RBP14.99□□□□□ -0.01
LIG1-202ENST00000427526 TXNP10599 105 aaKnown RBP14.99□□□□□ -0.01
LIG1-202ENST00000427526 FGFR1P11362 822 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 CA4P22748 312 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 IL1R2P27930 398 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 PSMC4P43686 418 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 EFNA5P52803 228 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 GEMIN4P57678 1058 aaKnown RBP14.99□□□□□ -0.01
LIG1-202ENST00000427526 MSS51Q4VC12 460 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 GJC2Q5T442 439 aaPredicted RBP14.99□□□□□ -0.01
LIG1-202ENST00000427526 LRRC71Q8N4P6 559 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 NAT8LQ8N9F0 302 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 ACTL9Q8TC94 416 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 TRAPPC12Q8WVT3 735 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 CPT1BQ92523 772 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 N4BP2L2Q92802 583 aaPredicted RBP14.99□□□□□ -0.01
LIG1-202ENST00000427526 DHRS4Q9BTZ2 278 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 MRPL4Q9BYD3 311 aaKnown RBP14.99□□□□□ -0.01
LIG1-202ENST00000427526 CYLDQ9NQC7 956 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 STK38LQ9Y2H1 464 aa14.99□□□□□ -0.01
LIG1-202ENST00000427526 GOLGA8SH3BPF8 625 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 GOLGA8MH3BSY2 632 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 OGTO15294 1046 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 LRCH4O75427 683 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 CTCFP49711 727 aaPredicted RBP14.98□□□□□ -0.01
LIG1-202ENST00000427526 OTUD4Q01804 1114 aaKnown RBP14.98□□□□□ -0.01
LIG1-202ENST00000427526 PTPN20Q4JDL3 420 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 FNBP1LQ5T0N5 605 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 ANKRD22Q5VYY1 191 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 CDCA2Q69YH5 1023 aaPredicted RBP14.98□□□□□ -0.01
LIG1-202ENST00000427526 SMYD5Q6GMV2 418 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 ANKMY2Q8IV38 441 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 PPIL6Q8IXY8 311 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 FBF1Q8TES7 1133 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 ZNF668Q96K58 619 aaPredicted RBP14.98□□□□□ -0.01
LIG1-202ENST00000427526 WDR83Q9BRX9 315 aaKnown RBP14.98□□□□□ -0.01
LIG1-202ENST00000427526 TCHPQ9BT92 498 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 ETNK1Q9HBU6 452 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 CYTH4Q9UIA0 394 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 ZBTB42B2RXF5 422 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 HOXC6P09630 235 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 SRGAP2CP0DJJ0 459 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 DENND1BQ6P3S1 775 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 JOSD2Q8TAC2 188 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 THOC1Q96FV9 657 aaKnown RBP14.98□□□□□ -0.01
LIG1-202ENST00000427526 FRMD8P1Q9BZ68 369 aaPredicted RBP14.98□□□□□ -0.01
LIG1-202ENST00000427526 LHX5Q9H2C1 402 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 C10orf88Q9H8K7 445 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 TXLNGQ9NUQ3 528 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 TJP2Q9UDY2 1190 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 STRIP2Q9ULQ0 834 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 E7ESA3 106 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 PDHXO00330 501 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 KRT4P19013 534 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 ADGRD1Q6QNK2 874 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 BBS12Q6ZW61 710 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 ZNF276Q8N554 614 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 FNIP1Q8TF40 1166 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 ERP27Q96DN0 273 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 LRRC37BQ96QE4 947 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 LRMDAQ9H2I8 198 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 C15orf41Q9Y2V0 281 aa14.98□□□□□ -0.01
LIG1-202ENST00000427526 CST8O60676 142 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 ATP5HO75947 161 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 KRT3P12035 628 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 KDELR1P24390 212 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 PSMA2P25787 234 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms