RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 RRM1P23921 792 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 FLT3LGP49771 235 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 POLD3Q15054 466 aaPredicted RBP14.46□□□□□ -0.09
RPL28-202ENST00000426763 LBX2Q6XYB7 198 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 SLC35C1Q96A29 364 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 BTBD6Q96KE9 485 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 GPR63Q9BZJ6 419 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 PPARGC1AQ9UBK2 798 aaKnown RBP14.46□□□□□ -0.09
RPL28-202ENST00000426763 TSPAN16Q9UKR8 245 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 USP20Q9Y2K6 914 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 NR2E3Q9Y5X4 410 aa14.46□□□□□ -0.09
RPL28-202ENST00000426763 GNGT2O14610 69 aa14.46□□□□□ -0.1
RPL28-202ENST00000426763 FDFT1P37268 417 aa14.46□□□□□ -0.1
RPL28-202ENST00000426763 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.1
RPL28-202ENST00000426763 NAA25Q14CX7 972 aa14.46□□□□□ -0.1
RPL28-202ENST00000426763 C2CD6Q53TS8 623 aa14.46□□□□□ -0.1
RPL28-202ENST00000426763 SPRYD7Q5W111 196 aa14.46□□□□□ -0.1
RPL28-202ENST00000426763 FAM47EQ6ZV65 393 aa14.46□□□□□ -0.1
RPL28-202ENST00000426763 HERC6Q8IVU3 1022 aa14.46□□□□□ -0.1
RPL28-202ENST00000426763 PDCD7Q8N8D1 485 aaKnown RBP14.46□□□□□ -0.1
RPL28-202ENST00000426763 FAM71DQ8N9W8 422 aa14.46□□□□□ -0.1
RPL28-202ENST00000426763 SLC20A1Q8WUM9 679 aa14.46□□□□□ -0.1
RPL28-202ENST00000426763 SMARCD1Q96GM5 515 aa14.46□□□□□ -0.1
RPL28-202ENST00000426763 ELAC2Q9BQ52 826 aaKnown RBP14.46□□□□□ -0.1
RPL28-202ENST00000426763 PPCSQ9HAB8 311 aa14.46□□□□□ -0.1
RPL28-202ENST00000426763 TRIM33Q9UPN9 1127 aa14.46□□□□□ -0.1
RPL28-202ENST00000426763 SLC4A7Q9Y6M7 1214 aa14.46□□□□□ -0.1
RPL28-202ENST00000426763 CCDC195A0A1B0GUA6 201 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 TMEM247A6NEH6 219 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 CFAP99D6REC4 459 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 TLR2O60603 784 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 POLBP06746 335 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 COILP38432 576 aaPredicted RBP14.45□□□□□ -0.1
RPL28-202ENST00000426763 COG1Q8WTW3 980 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 ATP6V1G3Q96LB4 118 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 FOPNLQ96NB1 174 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 ZNF212Q9UDV6 495 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 KIF3CO14782 793 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 PAEPP09466 180 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 HIST1H2AGP0C0S8 130 aaPredicted RBP14.45□□□□□ -0.1
RPL28-202ENST00000426763 HIST1H2ADP20671 130 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 HABP4Q5JVS0 413 aaKnown RBP14.45□□□□□ -0.1
RPL28-202ENST00000426763 TIGD7Q6NT04 549 aaPredicted RBP14.45□□□□□ -0.1
RPL28-202ENST00000426763 ZNF571Q7Z3V5 609 aaPredicted RBP14.45□□□□□ -0.1
RPL28-202ENST00000426763 HIST1H2AHQ96KK5 128 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 HIST1H2AJQ99878 128 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 H2AFJQ9BTM1 129 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 CELF4Q9BZC1 486 aaKnown RBP14.45□□□□□ -0.1
RPL28-202ENST00000426763 SLC13A4Q9UKG4 626 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 USH1CQ9Y6N9 552 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 TTLL13PA6NNM8 815 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 MAP4P27816 1152 aaKnown RBP14.45□□□□□ -0.1
RPL28-202ENST00000426763 FNTAP49354 379 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 FAM133BQ5BKY9 247 aaKnown RBP14.45□□□□□ -0.1
RPL28-202ENST00000426763 ZDHHC17Q8IUH5 632 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 PPIL6Q8IXY8 311 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 ETNPPLQ8TBG4 499 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 TACO1Q9BSH4 297 aaKnown RBP14.45□□□□□ -0.1
RPL28-202ENST00000426763 RRN3Q9NYV6 651 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 A0A0A6YYK5 440 aaPredicted RBP14.45□□□□□ -0.1
RPL28-202ENST00000426763 ZNF263O14978 683 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 CFLARO15519 480 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 KLRC2P26717 231 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 LIG3P49916 1009 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 GTF2BQ00403 316 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 TMEM86AQ8N2M4 240 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 BHMTQ93088 406 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 PPWD1Q96BP3 646 aaKnown RBP14.45□□□□□ -0.1
RPL28-202ENST00000426763 GAD1Q99259 594 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 DUSP9Q99956 384 aaKnown RBP14.45□□□□□ -0.1
RPL28-202ENST00000426763 EPC1Q9H2F5 836 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 ATP9AO75110 1047 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 PROSCO94903 275 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 ACAT1P24752 427 aaKnown RBP14.45□□□□□ -0.1
RPL28-202ENST00000426763 HADHAP40939 763 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 GEMP55040 296 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 SH3RF1Q7Z6J0 888 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 TMEM199Q8N511 208 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 RXFP2Q8WXD0 754 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 ELOVL4Q9GZR5 314 aa14.45□□□□□ -0.1
RPL28-202ENST00000426763 ASS1P00966 412 aaKnown RBP14.44□□□□□ -0.1
RPL28-202ENST00000426763 VSNL1P62760 191 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 PDCLQ13371 301 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 SHROOM1Q2M3G4 852 aaPredicted RBP14.44□□□□□ -0.1
RPL28-202ENST00000426763 TFDP3Q5H9I0 405 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 PPTC7Q8NI37 304 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 ZNF606Q8WXB4 792 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 FTHL17Q9BXU8 183 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 C20orf96Q9NUD7 363 aaPredicted RBP14.44□□□□□ -0.1
RPL28-202ENST00000426763 FGFR1OP2Q9NVK5 253 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 AP4E1Q9UPM8 1137 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 CCDC78A2IDD5 438 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 RAD51CO43502 376 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 MYO1DO94832 1006 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 HMGCRP04035 888 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 MYL4P12829 197 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 SESN3P58005 492 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 MTA1Q13330 715 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 RBBP7Q16576 425 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 DUSP28Q4G0W2 176 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms