RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 DEFB129Q9H1M3 183 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 RNF112Q9ULX5 631 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 H2AFYO75367 372 aaKnown RBP18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 THPOP40225 353 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 GEMP55040 296 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 KLC1Q07866 573 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 SRLQ86TD4 932 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 TRIM48Q8IWZ4 208 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 TEX9Q8N6V9 391 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 GPRASP2Q96D09 838 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 UBQLN1Q9UMX0 589 aaKnown RBP18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 CAB39Q9Y376 341 aaPredicted RBP18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 SLC11A2P49281 568 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 SAMD7Q7Z3H4 446 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 FBXO33Q7Z6M2 555 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 C2orf81A6NN90 581 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 PSTPIP1O43586 416 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 UBTFL6P0CB48 400 aaPredicted RBP18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 ALDH7A1P49419 539 aaKnown RBP18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 OOSP2Q86WS3 158 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 P3H2Q8IVL5 708 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 CCDC33Q8N5R6 958 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 MAP3K14Q99558 947 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 NCF1BA6NI72 391 aaPredicted RBP18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 NCF1CA8MVU1 366 aaPredicted RBP18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 NTSR2O95665 410 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 NCF1P14598 390 aaPredicted RBP18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 TRIM65Q6PJ69 517 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 CCT7Q99832 543 aa18.63■□□□□ 0.57
ARHGEF28-203ENST00000426542 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 AP1G2O75843 785 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 FDPSP14324 419 aaKnown RBP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 TCF3P15923 654 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 NUDT2P50583 147 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 RDM1Q8NG50 284 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 MDM1Q8TC05 714 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 DNAJC9Q8WXX5 260 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 GFM2Q969S9 779 aaKnown RBP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 RPRD1AQ96P16 312 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 NMRK2Q9NPI5 230 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 PRR23AA6NEV1 266 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 ALOX15P16050 662 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 PRKCQQ04759 706 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 WLSQ5T9L3 541 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 FAM111AQ96PZ2 611 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 RUVBL2Q9Y230 463 aaKnown RBP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 CELF2O95319 508 aaKnown RBP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 CCND1P24385 295 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 PWP1Q13610 501 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 CCDC81Q6ZN84 652 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 SLC13A5Q86YT5 568 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 MMGT1Q8N4V1 131 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 EIF3LQ9Y262 564 aaKnown RBP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 IGF2BP3O00425 579 aaKnown RBP eCLIP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 NPM3O75607 178 aaKnown RBP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 CLK1P49759 484 aaKnown RBP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 SLC16A1P53985 500 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 PLIN5Q00G26 463 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 BOLA3Q53S33 107 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 AGAP9Q5VTM2 703 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 KCNB2Q92953 911 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 COLEC11Q9BWP8 271 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 IQGAP3Q86VI3 1631 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 LRRIQ3A6PVS8 624 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 ASS1P00966 412 aaKnown RBP18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 CYP2C8P10632 490 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 VPS9D1Q9Y2B5 631 aa18.62■□□□□ 0.57
ARHGEF28-203ENST00000426542 CCT8L1PA6NM43 557 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 F8W810 466 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 RNF180Q86T96 592 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 KCTD17Q8N5Z5 321 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 CNBD2Q96M20 576 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 MTMR12Q9C0I1 747 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 SCUBE2Q9NQ36 999 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 ZSCAN32Q9NX65 697 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 SKAP2O75563 359 aaPredicted RBP18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 MAP3K6O95382 1288 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 CTDNEP1O95476 244 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 PLEKP08567 350 aaPredicted RBP18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 YY1P25490 414 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 HUNKP57058 714 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 OVGP1Q12889 678 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 CHMP1BQ7LBR1 199 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 CCDC60Q8IWA6 550 aaPredicted RBP18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 ZSWIM1Q9BR11 485 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 THUMPD3Q9BV44 507 aaKnown RBP18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 F5H5T6 163 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 M0R3G1 203 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 SLC2A3P11169 496 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 PON1P27169 355 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 SEC24CP53992 1094 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 DNAJC3Q13217 504 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 TTLL9Q3SXZ7 439 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 ICAM1P05362 532 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 HSD17B3P37058 310 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 PRIM2P49643 509 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 COPAP53621 1224 aa18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 POLD3Q15054 466 aaPredicted RBP18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 ARID3BQ8IVW6 561 aaPredicted RBP18.61■□□□□ 0.57
ARHGEF28-203ENST00000426542 UNC45BQ8IWX7 931 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms