RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 POMGNT1Q8WZA1 660 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 BCCIPQ9P287 314 aaKnown RBP eCLIP15.74■□□□□ 0.11
PDAP1-202ENST00000426447 AGAP1Q9UPQ3 857 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 FAM208BQ5VWN6 2430 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 FRYQ5TBA9 3013 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 EML5Q05BV3 1969 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 CEP295Q9C0D2 2601 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 C2orf78A6NCI8 922 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 TISP43B9A030 160 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 TNFRSF10BO14763 440 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 IL18RAPO95256 599 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 ENGP17813 658 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 OPRD1P41143 372 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 PDE6CP51160 858 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 ZNF131P52739 623 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 SIM1P81133 766 aaPredicted RBP15.73■□□□□ 0.11
PDAP1-202ENST00000426447 TFAMQ00059 246 aaKnown RBP15.73■□□□□ 0.11
PDAP1-202ENST00000426447 POU5F1Q01860 360 aaKnown RBP15.73■□□□□ 0.11
PDAP1-202ENST00000426447 BYSLQ13895 437 aaKnown RBP15.73■□□□□ 0.11
PDAP1-202ENST00000426447 INTS6LQ5JSJ4 861 aaKnown RBP15.73■□□□□ 0.11
PDAP1-202ENST00000426447 SYT12Q8IV01 421 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 TMEM86AQ8N2M4 240 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 WHAMMQ8TF30 809 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 CACTINQ8WUQ7 758 aaKnown RBP15.73■□□□□ 0.11
PDAP1-202ENST00000426447 POLMQ9NP87 494 aaPredicted RBP15.73■□□□□ 0.11
PDAP1-202ENST00000426447 GCNT4Q9P109 453 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 MSRB2Q9Y3D2 182 aa15.73■□□□□ 0.11
PDAP1-202ENST00000426447 BAHCC1Q9P281 2608 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 SPAARA0A1B0GVQ0 90 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 ITGB3P05106 788 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 CFIP05156 583 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 POLR2BP30876 1174 aaKnown RBP15.72■□□□□ 0.11
PDAP1-202ENST00000426447 TIE1P35590 1138 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 MCM6Q14566 821 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 POSTNQ15063 836 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 ARL6IP4Q66PJ3 421 aaKnown RBP15.72■□□□□ 0.11
PDAP1-202ENST00000426447 TMEM92Q6UXU6 159 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 HDDC3Q8N4P3 179 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 CSGALNACT2Q8N6G5 542 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 ALLCQ8N6M5 410 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 TXNDC5Q8NBS9 432 aaKnown RBP15.72■□□□□ 0.11
PDAP1-202ENST00000426447 OLIG1Q8TAK6 271 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 AK8Q96MA6 479 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 GTPBP2Q9BX10 602 aaKnown RBP15.72■□□□□ 0.11
PDAP1-202ENST00000426447 TMEM74BQ9NUR3 256 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 KLK13Q9UKR3 277 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 L1RE1Q9UN81 338 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 ARHGAP26Q9UNA1 814 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 STYXL1Q9Y6J8 313 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 ATRXP46100 2492 aa15.72■□□□□ 0.11
PDAP1-202ENST00000426447 ANTXRLA6NF34 631 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 LEFTY2O00292 366 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 SLC26A4O43511 780 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 KLF8O95600 359 aaPredicted RBP15.71■□□□□ 0.11
PDAP1-202ENST00000426447 KRT19P08727 400 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 P2RY2P41231 377 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 DPP6P42658 865 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 PTGER3P43115 390 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 LHX1P48742 406 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 CFAP221Q4G0U5 840 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 EOGTQ5NDL2 527 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 LYSMD4Q5XG99 296 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 CRELD2Q6UXH1 353 aaPredicted RBP15.71■□□□□ 0.11
PDAP1-202ENST00000426447 FRMD1Q8N878 549 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 SPATA18Q8TC71 538 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 FNBP1Q96RU3 617 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 PNKPQ96T60 521 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 FAM213AQ9BRX8 229 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 TRPM5Q9NZQ8 1165 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 R3HCC1Q9Y3T6 440 aaKnown RBP15.71■□□□□ 0.11
PDAP1-202ENST00000426447 KIF3AQ9Y496 699 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 SNX9Q9Y5X1 595 aa15.71■□□□□ 0.11
PDAP1-202ENST00000426447 MYH11P35749 1972 aa15.71■□□□□ 0.1
PDAP1-202ENST00000426447 H0Y626 953 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 TRIM16O95361 564 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 ABL1P00519 1130 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 APODP05090 189 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 TCF3P15923 654 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 PLCG1P19174 1290 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 PCSK1P29120 753 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 GRIK1P39086 918 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 SLC6A11P48066 632 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 GFPT1Q06210 699 aaPredicted RBP15.7■□□□□ 0.1
PDAP1-202ENST00000426447 SPDYCQ5MJ68 293 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 SLC23A3Q6PIS1 610 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 C4orf50Q6ZRC1 276 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 FILIP1Q7Z7B0 1213 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 ADGRG2Q8IZP9 1017 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 KRI1Q8N9T8 703 aaKnown RBP15.7■□□□□ 0.1
PDAP1-202ENST00000426447 HMGB4Q8WW32 186 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 FUBP3Q96I24 572 aaKnown RBP eCLIP15.7■□□□□ 0.1
PDAP1-202ENST00000426447 FIZ1Q96SL8 496 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 MAGEC2Q9UBF1 373 aaPredicted RBP15.7■□□□□ 0.1
PDAP1-202ENST00000426447 TSC2P49815 1807 aa15.7■□□□□ 0.1
PDAP1-202ENST00000426447 ATXN2Q99700 1313 aaKnown RBP15.69■□□□□ 0.1
PDAP1-202ENST00000426447 ZNF638Q14966 1978 aaKnown RBP15.69■□□□□ 0.1
PDAP1-202ENST00000426447 SGK1O00141 431 aa15.69■□□□□ 0.1
PDAP1-202ENST00000426447 SLC9A3R1O14745 358 aaPredicted RBP15.69■□□□□ 0.1
PDAP1-202ENST00000426447 KAT7O95251 611 aa15.69■□□□□ 0.1
PDAP1-202ENST00000426447 HNRNPLP14866 589 aaKnown RBP eCLIP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms