RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 KIAA1257Q9ULG3 409 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 RFX1P22670 979 aa25.98■■□□□ 1.75
VEGFA-209ENST00000425836 ADORA2BP29275 332 aa25.98■■□□□ 1.75
VEGFA-209ENST00000425836 SMAD2Q15796 467 aaKnown RBP25.98■■□□□ 1.75
VEGFA-209ENST00000425836 ARHGAP17Q68EM7 881 aa25.98■■□□□ 1.75
VEGFA-209ENST00000425836 PSMG2Q969U7 264 aa25.98■■□□□ 1.75
VEGFA-209ENST00000425836 NECTIN4Q96NY8 510 aa25.98■■□□□ 1.75
VEGFA-209ENST00000425836 GPR88Q9GZN0 384 aa25.98■■□□□ 1.75
VEGFA-209ENST00000425836 WDR6Q9NNW5 1121 aaKnown RBP25.98■■□□□ 1.75
VEGFA-209ENST00000425836 ASB3Q9Y575 518 aa25.98■■□□□ 1.75
VEGFA-209ENST00000425836 MTCL1Q9Y4B5 1905 aaKnown RBP25.97■■□□□ 1.75
VEGFA-209ENST00000425836 F8VP50 259 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 FOXN3O00409 490 aaPredicted RBP25.97■■□□□ 1.75
VEGFA-209ENST00000425836 VDRP11473 427 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 IL9P15248 144 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 CD19P15391 556 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 PTPN2P17706 415 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 NTHL1P78549 312 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 RAPGEF1Q13905 1077 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 DRAP1Q14919 205 aaPredicted RBP25.97■■□□□ 1.75
VEGFA-209ENST00000425836 SMYD5Q6GMV2 418 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 DNAJB7Q7Z6W7 309 aaPredicted RBP25.97■■□□□ 1.75
VEGFA-209ENST00000425836 TFAP2BQ92481 460 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 SMARCD1Q96GM5 515 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 C8orf48Q96LL4 319 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 ANP32EQ9BTT0 268 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 RBSNQ9H1K0 784 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 POMKQ9H5K3 350 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 KRT82Q9NSB4 513 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 IFNKQ9P0W0 207 aa25.97■■□□□ 1.75
VEGFA-209ENST00000425836 TRIM66O15016 1216 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 AP1G2O75843 785 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 CALCAP01258 141 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 USP8P40818 1118 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 POLR2FP61218 127 aaKnown RBP25.96■■□□□ 1.75
VEGFA-209ENST00000425836 VEPH1Q14D04 833 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 SGO2Q562F6 1265 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.96■■□□□ 1.753e-13■■□□□ 13.7
VEGFA-209ENST00000425836 HS6ST3Q8IZP7 471 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 NEK11Q8NG66 645 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 KCNK16Q96T55 309 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 SMOQ99835 787 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 ZSWIM1Q9BR11 485 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 CORO1BQ9BR76 489 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 STK33Q9BYT3 514 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 FAM50BQ9Y247 325 aa25.96■■□□□ 1.75
VEGFA-209ENST00000425836 A0A1W2PQC6 194 aa25.95■■□□□ 1.75
VEGFA-209ENST00000425836 SLC34A2O95436 690 aa25.95■■□□□ 1.75
VEGFA-209ENST00000425836 RHOP08100 348 aa25.95■■□□□ 1.75
VEGFA-209ENST00000425836 FAM200BP0CF97 657 aa25.95■■□□□ 1.75
VEGFA-209ENST00000425836 ITIH5Q86UX2 942 aa25.95■■□□□ 1.75
VEGFA-209ENST00000425836 STKLD1Q8NE28 680 aa25.95■■□□□ 1.75
VEGFA-209ENST00000425836 SPATA17Q96L03 361 aa25.95■■□□□ 1.75
VEGFA-209ENST00000425836 LRRC3Q9BY71 257 aa25.95■■□□□ 1.75
VEGFA-209ENST00000425836 CSNK1G1Q9HCP0 422 aa25.95■■□□□ 1.75
VEGFA-209ENST00000425836 BEST1O76090 585 aa25.95■■□□□ 1.74
VEGFA-209ENST00000425836 PNMA6AP0CW24 399 aaPredicted RBP25.95■■□□□ 1.74
VEGFA-209ENST00000425836 BMP1P13497 986 aa25.95■■□□□ 1.74
VEGFA-209ENST00000425836 MTMR3Q13615 1198 aa25.95■■□□□ 1.74
VEGFA-209ENST00000425836 PABPC1LQ4VXU2 614 aaKnown RBP25.95■■□□□ 1.74
VEGFA-209ENST00000425836 FAM71AQ8IYT1 594 aa25.95■■□□□ 1.74
VEGFA-209ENST00000425836 ZMIZ2Q8NF64 920 aa25.95■■□□□ 1.74
VEGFA-209ENST00000425836 DMAP1Q9NPF5 467 aaPredicted RBP25.95■■□□□ 1.74
VEGFA-209ENST00000425836 DAAM1Q9Y4D1 1078 aa25.95■■□□□ 1.74
VEGFA-209ENST00000425836 CLUHO75153 1309 aa25.94■■□□□ 1.74
VEGFA-209ENST00000425836 O00370 1275 aa25.94■■□□□ 1.74
VEGFA-209ENST00000425836 HMGA1P17096 107 aaKnown RBP25.94■■□□□ 1.74
VEGFA-209ENST00000425836 BRD2P25440 801 aaKnown RBP25.94■■□□□ 1.74
VEGFA-209ENST00000425836 ANXA13P27216 316 aa25.94■■□□□ 1.74
VEGFA-209ENST00000425836 EPHA5P54756 1037 aa25.94■■□□□ 1.74
VEGFA-209ENST00000425836 TMC8Q8IU68 726 aa25.94■■□□□ 1.74
VEGFA-209ENST00000425836 CEP295NLQ96MC4 621 aa25.94■■□□□ 1.74
VEGFA-209ENST00000425836 DUSP16Q9BY84 665 aa25.94■■□□□ 1.74
VEGFA-209ENST00000425836 ACP6Q9NPH0 428 aa25.94■■□□□ 1.74
VEGFA-209ENST00000425836 NLRC4Q9NPP4 1024 aa25.94■■□□□ 1.74
VEGFA-209ENST00000425836 SLC38A8A6NNN8 435 aa25.93■■□□□ 1.74
VEGFA-209ENST00000425836 F8VZ95 297 aa25.93■■□□□ 1.74
VEGFA-209ENST00000425836 CYP26A1O43174 497 aa25.93■■□□□ 1.74
VEGFA-209ENST00000425836 CSH1P0DML2 217 aa25.93■■□□□ 1.74
VEGFA-209ENST00000425836 CSH2P0DML3 217 aa25.93■■□□□ 1.74
VEGFA-209ENST00000425836 MAP3K7CLP57077 242 aa25.93■■□□□ 1.74
VEGFA-209ENST00000425836 CNGA2Q16280 664 aa25.93■■□□□ 1.74
VEGFA-209ENST00000425836 CLEC20AQ6ZU45 233 aa25.93■■□□□ 1.74
VEGFA-209ENST00000425836 ANKRD52Q8NB46 1076 aa25.93■■□□□ 1.74
VEGFA-209ENST00000425836 XPO4Q9C0E2 1151 aaKnown RBP25.93■■□□□ 1.74
VEGFA-209ENST00000425836 ZNF334Q9HCZ1 680 aaPredicted RBP25.93■■□□□ 1.74
VEGFA-209ENST00000425836 AVENQ9NQS1 362 aaPredicted RBP25.93■■□□□ 1.74
VEGFA-209ENST00000425836 ASAH2Q9NR71 780 aa25.93■■□□□ 1.74
VEGFA-209ENST00000425836 TSPAN16Q9UKR8 245 aa25.93■■□□□ 1.74
VEGFA-209ENST00000425836 NPR3P17342 541 aa25.92■■□□□ 1.74
VEGFA-209ENST00000425836 CLCN1P35523 988 aa25.92■■□□□ 1.74
VEGFA-209ENST00000425836 PBX1P40424 430 aa25.92■■□□□ 1.74
VEGFA-209ENST00000425836 JAM2P57087 298 aa25.92■■□□□ 1.74
VEGFA-209ENST00000425836 TAF12Q16514 161 aa25.92■■□□□ 1.74
VEGFA-209ENST00000425836 GOLGA7BQ2TAP0 167 aa25.92■■□□□ 1.74
VEGFA-209ENST00000425836 LCLAT1Q6UWP7 414 aa25.92■■□□□ 1.74
VEGFA-209ENST00000425836 PHF7Q9BWX1 381 aaPredicted RBP25.92■■□□□ 1.74
VEGFA-209ENST00000425836 FSHRP23945 695 aa25.91■■□□□ 1.74
VEGFA-209ENST00000425836 CCR2P41597 374 aa25.91■■□□□ 1.74
VEGFA-209ENST00000425836 SLC5A9Q2M3M2 681 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms