RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 LTB4R2Q9NPC1 389 aa19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 DMDP11532 3685 aa19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 CLDN5O00501 218 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 CHADO15335 359 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 RFX1P22670 979 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 TARSP26639 723 aaKnown RBP19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 GRIK1P39086 918 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 USP46P62068 366 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 SCARA5Q6ZMJ2 495 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 MON1AQ86VX9 555 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 ADSSL1Q8N142 457 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 B3GALNT2Q8NCR0 500 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 RIN3Q8TB24 985 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 TAS1R2Q8TE23 839 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 ATOH1Q92858 354 aaPredicted RBP19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 USP13Q92995 863 aaPredicted RBP19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 SMARCE1Q969G3 411 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 ZFYVE19Q96K21 471 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 GCNAQ96QF7 691 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 OSBPL6Q9BZF3 934 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 ZNF518BQ9C0D4 1074 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 CCL26Q9Y258 94 aa19.55■□□□□ 0.72
SMARCAL1-205ENST00000425815 SOBPA7XYQ1 873 aa19.54■□□□□ 0.72
SMARCAL1-205ENST00000425815 SMC2O95347 1197 aa19.54■□□□□ 0.72
SMARCAL1-205ENST00000425815 CD44P16070 742 aaKnown RBP19.54■□□□□ 0.72
SMARCAL1-205ENST00000425815 BMP6P22004 513 aa19.54■□□□□ 0.72
SMARCAL1-205ENST00000425815 ASPAP45381 313 aa19.54■□□□□ 0.72
SMARCAL1-205ENST00000425815 UBXN2BQ14CS0 331 aa19.54■□□□□ 0.72
SMARCAL1-205ENST00000425815 ANGPT1Q15389 498 aa19.54■□□□□ 0.72
SMARCAL1-205ENST00000425815 ISM2Q6H9L7 571 aa19.54■□□□□ 0.72
SMARCAL1-205ENST00000425815 ZNF852Q6ZMS4 543 aa19.54■□□□□ 0.72
SMARCAL1-205ENST00000425815 TAF4BQ92750 862 aa19.54■□□□□ 0.72
SMARCAL1-205ENST00000425815 C8orf48Q96LL4 319 aa19.54■□□□□ 0.72
SMARCAL1-205ENST00000425815 MAN1B1Q9UKM7 699 aa19.54■□□□□ 0.72
SMARCAL1-205ENST00000425815 F8VP50 259 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 KRT13P13646 458 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 DDX6P26196 483 aaKnown RBP eCLIP19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 MRE11P49959 708 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 MAML2Q8IZL2 1156 aaPredicted RBP19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 BPIFB1Q8TDL5 484 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 MRPS31Q92665 395 aaKnown RBP19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 SEMA4DQ92854 862 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 CLDN23Q96B33 292 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 CEP295NLQ96MC4 621 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 SLC22A12Q96S37 553 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 CYP2S1Q96SQ9 504 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 IRF2BPLQ9H1B7 796 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 TMEM8AQ9HCN3 771 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 GCNT4Q9P109 453 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 UXTQ9UBK9 157 aaPredicted RBP19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 HMGXB4Q9UGU5 601 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 ZMYM5Q9UJ78 669 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 MYO15AQ9UKN7 3530 aa19.53■□□□□ 0.72
SMARCAL1-205ENST00000425815 TRIM49BA6NDI0 452 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 DPYSL4O14531 572 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 CETN3O15182 167 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 GTF2H1P32780 548 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 PIK3CAP42336 1068 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 ORC1Q13415 861 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 ACOT1Q86TX2 421 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 YAF2Q8IY57 180 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 CRYBG2Q8N1P7 616 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 CELF5Q8N6W0 485 aaKnown RBP19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 KCNK16Q96T55 309 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 TTLL2Q9BWV7 592 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 BCO2Q9BYV7 579 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 MMRN2Q9H8L6 949 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 TDP1Q9NUW8 608 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 PIAS3Q9Y6X2 628 aa19.52■□□□□ 0.72
SMARCAL1-205ENST00000425815 C2orf78A6NCI8 922 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 TRIM66O15016 1216 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 AVPR1AP37288 418 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 SOX9P48436 509 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 NDST1P52848 882 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 MLLT6P55198 1093 aaPredicted RBP19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 NOP14P78316 857 aaKnown RBP19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 TNK2Q07912 1038 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 ARHGAP29Q52LW3 1261 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 DENND5BQ6ZUT9 1274 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 C1orf210Q8IVY1 113 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 FUKQ8N0W3 1084 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 TTC8Q8TAM2 541 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 WHAMMQ8TF30 809 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 TWNKQ96RR1 684 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 NELL2Q99435 816 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 FAM83CQ9BQN1 747 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 ELOVL4Q9GZR5 314 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 GTSE1Q9NYZ3 720 aa19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 HOOK1Q9UJC3 728 aaKnown RBP19.51■□□□□ 0.71
SMARCAL1-205ENST00000425815 PPP1R3GB7ZBB8 358 aa19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 MAN2B1O00754 1011 aa19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 P4HA1P13674 534 aa19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 CCNE1P24864 410 aa19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 ZXDBP98169 803 aa19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 FKBP3Q00688 224 aaKnown RBP19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 ZNF268Q14587 947 aaPredicted RBP19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 WDR44Q5JSH3 913 aa19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 KRT39Q6A163 491 aa19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 UNC93AQ86WB7 457 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms