RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 MTMR8Q96EF0 704 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 EBF3Q9H4W6 596 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 PNPOQ9NVS9 261 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 TRNAU1APQ9NX07 287 aaKnown RBP6.1□□□□□ -1.43
LINC01040-201ENST00000425048 ZNF580Q9UK33 172 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 E5RJQ4 531 aa6.09□□□□□ -1.43
LINC01040-201ENST00000425048 UBE2Q2LH0YL09 131 aa6.09□□□□□ -1.43
LINC01040-201ENST00000425048 EXOC3O60645 756 aa6.09□□□□□ -1.43
LINC01040-201ENST00000425048 DTNBO60941 627 aa6.09□□□□□ -1.43
LINC01040-201ENST00000425048 FGBP02675 491 aa6.09□□□□□ -1.43
LINC01040-201ENST00000425048 CHRM5P08912 532 aaPredicted RBP6.09□□□□□ -1.43
LINC01040-201ENST00000425048 IL1R2P27930 398 aa6.09□□□□□ -1.43
LINC01040-201ENST00000425048 TPTEP56180 551 aa6.09□□□□□ -1.43
LINC01040-201ENST00000425048 LRRC41Q15345 812 aa6.09□□□□□ -1.43
LINC01040-201ENST00000425048 RGS7BPQ6MZT1 257 aaPredicted RBP6.09□□□□□ -1.43
LINC01040-201ENST00000425048 PRR18Q8N4B5 295 aa6.09□□□□□ -1.43
LINC01040-201ENST00000425048 TERB1Q8NA31 727 aa6.09□□□□□ -1.43
LINC01040-201ENST00000425048 FAM118BQ9BPY3 351 aa6.09□□□□□ -1.43
LINC01040-201ENST00000425048 CYP2A6P11509 494 aaPredicted RBP6.08□□□□□ -1.44
LINC01040-201ENST00000425048 KRTAP10-7P60409 375 aaPredicted RBP6.08□□□□□ -1.44
LINC01040-201ENST00000425048 EXOSC9Q06265 439 aaKnown RBP6.08□□□□□ -1.44
LINC01040-201ENST00000425048 KIRREL2Q6UWL6 708 aa6.08□□□□□ -1.44
LINC01040-201ENST00000425048 SERPINA13PQ6UXR4 307 aa6.08□□□□□ -1.44
LINC01040-201ENST00000425048 PCSK9Q8NBP7 692 aaKnown RBP6.08□□□□□ -1.44
LINC01040-201ENST00000425048 SNX18Q96RF0 628 aa6.08□□□□□ -1.44
LINC01040-201ENST00000425048 THAP7Q9BT49 309 aaPredicted RBP6.08□□□□□ -1.44
LINC01040-201ENST00000425048 KLHL13Q9P2N7 655 aa6.08□□□□□ -1.44
LINC01040-201ENST00000425048 NDRG4Q9ULP0 352 aaKnown RBP6.08□□□□□ -1.44
LINC01040-201ENST00000425048 TNKSO95271 1327 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 CNTNAP2Q9UHC6 1331 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 FCHO1O14526 889 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 ERC2O15083 957 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 KATNA1O75449 491 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 USP1O94782 785 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 ZRANB2O95218 330 aaKnown RBP eCLIP6.07□□□□□ -1.44
LINC01040-201ENST00000425048 PDE8BO95263 885 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 CDK11BP21127 795 aaKnown RBP6.07□□□□□ -1.44
LINC01040-201ENST00000425048 ATP5F1P24539 256 aaPredicted RBP6.07□□□□□ -1.44
LINC01040-201ENST00000425048 CCKARP32238 428 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 MAP2K6P52564 334 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 TWIST1Q15672 202 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 L1TD1Q5T7N2 865 aaKnown RBP6.07□□□□□ -1.44
LINC01040-201ENST00000425048 EMC10Q5UCC4 262 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 USP45Q70EL2 814 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 C16orf52Q8NHV5 167 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 BRIX1Q8TDN6 353 aaKnown RBP6.07□□□□□ -1.44
LINC01040-201ENST00000425048 NSMCE1Q8WV22 266 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 KRTAP2-2Q9BYT5 123 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 TFCP2L1Q9NZI6 479 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 SCAF8Q9UPN6 1271 aaKnown RBP6.07□□□□□ -1.44
LINC01040-201ENST00000425048 PLEKHM1Q9Y4G2 1056 aa6.07□□□□□ -1.44
LINC01040-201ENST00000425048 H3BUI4 141 aa6.06□□□□□ -1.44
LINC01040-201ENST00000425048 PRKCBP05771 671 aa6.06□□□□□ -1.44
LINC01040-201ENST00000425048 TMEM191BP0C7N4 346 aa6.06□□□□□ -1.44
LINC01040-201ENST00000425048 HDCP19113 662 aa6.06□□□□□ -1.44
LINC01040-201ENST00000425048 SATB1Q01826 763 aa6.06□□□□□ -1.44
LINC01040-201ENST00000425048 IRF2BP2Q7Z5L9 587 aa6.06□□□□□ -1.44
LINC01040-201ENST00000425048 LENG8Q96PV6 779 aaPredicted RBP6.06□□□□□ -1.44
LINC01040-201ENST00000425048 DPCDQ9BVM2 203 aaPredicted RBP6.06□□□□□ -1.44
LINC01040-201ENST00000425048 GABRQQ9UN88 632 aa6.06□□□□□ -1.44
LINC01040-201ENST00000425048 SHOC2Q9UQ13 582 aa6.06□□□□□ -1.44
LINC01040-201ENST00000425048 DSCR3O14972 297 aa6.05□□□□□ -1.44
LINC01040-201ENST00000425048 UNC5CO95185 931 aa6.05□□□□□ -1.44
LINC01040-201ENST00000425048 LRPAP1P30533 357 aa6.05□□□□□ -1.44
LINC01040-201ENST00000425048 VIPR2P41587 438 aa6.05□□□□□ -1.44
LINC01040-201ENST00000425048 CCDC157Q569K6 752 aa6.05□□□□□ -1.44
LINC01040-201ENST00000425048 SHC4Q6S5L8 630 aa6.05□□□□□ -1.44
LINC01040-201ENST00000425048 ZNF813Q6ZN06 617 aa6.05□□□□□ -1.44
LINC01040-201ENST00000425048 NRACQ8N912 160 aa6.05□□□□□ -1.44
LINC01040-201ENST00000425048 SOCS4Q8WXH5 440 aa6.05□□□□□ -1.44
LINC01040-201ENST00000425048 COQ8BQ96D53 544 aa6.05□□□□□ -1.44
LINC01040-201ENST00000425048 ZC3H10Q96K80 434 aaKnown RBP6.05□□□□□ -1.44
LINC01040-201ENST00000425048 CIPCQ9C0C6 399 aa6.05□□□□□ -1.44
LINC01040-201ENST00000425048 SPEF1Q9Y4P9 236 aa6.05□□□□□ -1.44
LINC01040-201ENST00000425048 GRPP07492 148 aa6.04□□□□□ -1.44
LINC01040-201ENST00000425048 POU2F2P09086 479 aa6.04□□□□□ -1.44
LINC01040-201ENST00000425048 RECQLP46063 649 aaPredicted RBP6.04□□□□□ -1.44
LINC01040-201ENST00000425048 KCNJ5P48544 419 aa6.04□□□□□ -1.44
LINC01040-201ENST00000425048 MEX3CQ5U5Q3 659 aaKnown RBP6.04□□□□□ -1.44
LINC01040-201ENST00000425048 ADAMTS18Q8TE60 1221 aa6.04□□□□□ -1.44
LINC01040-201ENST00000425048 XPR1Q9UBH6 696 aa6.04□□□□□ -1.44
LINC01040-201ENST00000425048 hCG_1984214I3L0E3 225 aa6.03□□□□□ -1.44
LINC01040-201ENST00000425048 PDE6CP51160 858 aa6.03□□□□□ -1.44
LINC01040-201ENST00000425048 RENBPP51606 427 aa6.03□□□□□ -1.44
LINC01040-201ENST00000425048 ALDH5A1P51649 535 aaPredicted RBP6.03□□□□□ -1.44
LINC01040-201ENST00000425048 SOX8P57073 446 aa6.03□□□□□ -1.44
LINC01040-201ENST00000425048 LINC00205P59089 165 aa6.03□□□□□ -1.44
LINC01040-201ENST00000425048 KRTAP10-6P60371 365 aaPredicted RBP6.03□□□□□ -1.44
LINC01040-201ENST00000425048 NKX6-1P78426 367 aaPredicted RBP6.03□□□□□ -1.44
LINC01040-201ENST00000425048 ZNF268Q14587 947 aaPredicted RBP6.03□□□□□ -1.44
LINC01040-201ENST00000425048 PLS1Q14651 629 aa6.03□□□□□ -1.44
LINC01040-201ENST00000425048 PGS1Q32NB8 556 aa6.03□□□□□ -1.44
LINC01040-201ENST00000425048 SLC15A3Q8IY34 581 aa6.03□□□□□ -1.44
LINC01040-201ENST00000425048 OSCP1Q8WVF1 389 aa6.03□□□□□ -1.44
LINC01040-201ENST00000425048 CUL5Q93034 780 aa6.03□□□□□ -1.44
LINC01040-201ENST00000425048 FYTTD1Q96QD9 318 aaKnown RBP6.03□□□□□ -1.44
LINC01040-201ENST00000425048 SARS2Q9NP81 518 aaKnown RBP6.03□□□□□ -1.44
LINC01040-201ENST00000425048 MRPS17Q9Y2R5 130 aaKnown RBP6.03□□□□□ -1.44
LINC01040-201ENST00000425048 IGKV2D-30A0A075B6S6 120 aa6.02□□□□□ -1.45
LINC01040-201ENST00000425048 TCRBV5S1A1TA0A578 114 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms