RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 RPGRIP1Q96KN7 1286 aa19.62■□□□□ 0.73
HDAC6-205ENST00000423941 ZNF334Q9HCZ1 680 aaPredicted RBP19.62■□□□□ 0.73
HDAC6-205ENST00000423941 NCOR1O75376 2440 aa19.62■□□□□ 0.73
HDAC6-205ENST00000423941 MYH10P35580 1976 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 PATJQ8NI35 1801 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 SMTNL1A8MU46 457 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 CAVIN2O95810 425 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 CSH1P0DML2 217 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 CSH2P0DML3 217 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 LAMP2P13473 410 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 VEPH1Q14D04 833 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 ARHGAP17Q68EM7 881 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 GAREM2Q75VX8 874 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 RRAGAQ7L523 313 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 ENOSF1Q7L5Y1 443 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 FAM35AQ86V20 835 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 GIPC2Q8TF65 315 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 FGF13Q92913 245 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 TCEAL4Q96EI5 215 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 CYFIP2Q96F07 1278 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 ASAH2Q9NR71 780 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 TAB2Q9NYJ8 693 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 IL37Q9NZH6 218 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 APEX2Q9UBZ4 518 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 CDH7Q9ULB5 785 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 ANAPC1Q9H1A4 1944 aa19.61■□□□□ 0.73
HDAC6-205ENST00000423941 F8VP50 259 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 RNF225M0QZC1 329 aaPredicted RBP19.6■□□□□ 0.73
HDAC6-205ENST00000423941 TRIM66O15016 1216 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 FGF19O95750 216 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 F11P03951 625 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 CCDC130P13994 396 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 ZNF132P52740 706 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 ZNF394Q53GI3 561 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 PPP1R26Q5T8A7 1209 aaPredicted RBP19.6■□□□□ 0.73
HDAC6-205ENST00000423941 CYP4A22Q5TCH4 519 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 PDZD4Q76G19 769 aaPredicted RBP19.6■□□□□ 0.73
HDAC6-205ENST00000423941 TMEM150AQ86TG1 271 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 NPAS3Q8IXF0 933 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 ZMIZ2Q8NF64 920 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 SLC2A14Q8TDB8 520 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 GPR152Q8TDT2 470 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 ACSF2Q96CM8 615 aaPredicted RBP19.6■□□□□ 0.73
HDAC6-205ENST00000423941 SMARCD1Q96GM5 515 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 FAM81BQ96LP2 452 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 SMOQ99835 787 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 TTLL2Q9BWV7 592 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 DNAI2Q9GZS0 605 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 VPS16Q9H269 839 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 UBE2TQ9NPD8 197 aaPredicted RBP19.6■□□□□ 0.73
HDAC6-205ENST00000423941 GDE1Q9NZC3 331 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 KIAA1257Q9ULG3 409 aa19.6■□□□□ 0.73
HDAC6-205ENST00000423941 MRPS23Q9Y3D9 190 aaKnown RBP19.6■□□□□ 0.73
HDAC6-205ENST00000423941 ATP8B3O60423 1300 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 MUC3AQ02505 3323 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 SLC38A8A6NNN8 435 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 ANHXE9PGG2 379 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 TNFRSF10BO14763 440 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 PAEPP09466 180 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 ATP1A3P13637 1013 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 TRIM21P19474 475 aaKnown RBP19.59■□□□□ 0.73
HDAC6-205ENST00000423941 GRIK1P39086 918 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 COPB1P53618 953 aaKnown RBP19.59■□□□□ 0.73
HDAC6-205ENST00000423941 APBA1Q02410 837 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 MTMR3Q13615 1198 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 SDHAF4Q5VUM1 108 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 SCN4BQ8IWT1 228 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 TDRD5Q8NAT2 981 aaKnown RBP19.59■□□□□ 0.73
HDAC6-205ENST00000423941 SHKBP1Q8TBC3 707 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 KCNK16Q96T55 309 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 CBX8Q9HC52 389 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 FAM49BQ9NUQ9 324 aa19.59■□□□□ 0.73
HDAC6-205ENST00000423941 BDP1A6H8Y1 2624 aa19.58■□□□□ 0.73
HDAC6-205ENST00000423941 BEST1O76090 585 aa19.58■□□□□ 0.72
HDAC6-205ENST00000423941 MYL4P12829 197 aa19.58■□□□□ 0.72
HDAC6-205ENST00000423941 CEBPBP17676 345 aa19.58■□□□□ 0.72
HDAC6-205ENST00000423941 MFAP3P55082 362 aa19.58■□□□□ 0.72
HDAC6-205ENST00000423941 GJB7Q6PEY0 223 aa19.58■□□□□ 0.72
HDAC6-205ENST00000423941 GET4Q7L5D6 327 aaPredicted RBP19.58■□□□□ 0.72
HDAC6-205ENST00000423941 RNF135Q8IUD6 432 aa19.58■□□□□ 0.72
HDAC6-205ENST00000423941 FAM200AQ8TCP9 573 aa19.58■□□□□ 0.72
HDAC6-205ENST00000423941 SHC3Q92529 594 aa19.58■□□□□ 0.72
HDAC6-205ENST00000423941 HEXIM2Q96MH2 286 aaKnown RBP19.58■□□□□ 0.72
HDAC6-205ENST00000423941 PLCB1Q9NQ66 1216 aa19.58■□□□□ 0.72
HDAC6-205ENST00000423941 TTC28Q96AY4 2481 aa19.58■□□□□ 0.72
HDAC6-205ENST00000423941 FAM92AA1XBS5 289 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 SOBPA7XYQ1 873 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 LGALS16A8MUM7 142 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 HHLA1C9JL84 531 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 AP1G2O75843 785 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 VDRP11473 427 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 GBP2P32456 591 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-205ENST00000423941 TMEM270Q6UE05 265 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 CLEC20AQ6ZU45 233 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 DENND5BQ6ZUT9 1274 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 STKLD1Q8NE28 680 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 NXPE3Q969Y0 559 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 NAA15Q9BXJ9 866 aaKnown RBP19.57■□□□□ 0.72
HDAC6-205ENST00000423941 DUSP16Q9BY84 665 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 UBXN6Q9BZV1 441 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms