RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 TRAK2O60296 914 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 ALDH1A2O94788 518 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 NFATC1O95644 943 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 CAPNS1P04632 268 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 CYP2F1P24903 491 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 PNPLA4P41247 253 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 DPP6P42658 865 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 ATP2C1P98194 919 aaPredicted RBP17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 GAB4Q2WGN9 574 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 SLFN12LQ6IEE8 588 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 KIAA1211LQ6NV74 962 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 TMEM92Q6UXU6 159 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 NT5DC4Q86YG4 428 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 KIAA1958Q8N8K9 716 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 ARL14EPQ8N8R7 260 aaPredicted RBP17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 FAM184AQ8NB25 1140 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 PKMYT1Q99640 499 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 PARVGQ9HBI0 331 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 ARHGAP26Q9UNA1 814 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 PTPRDP23468 1912 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 A0A0A0MRY4 1105 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 H0Y626 953 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 TRIM16O95361 564 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 HNRNPLP14866 589 aaKnown RBP eCLIP17.98■□□□□ 0.473e-8■■■■□ 21.4
CHCHD3-202ENST00000423635 ENGP17813 658 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 HDCP19113 662 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 SEC13P55735 322 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 CFAP221Q4G0U5 840 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 HSF5Q4G112 596 aaPredicted RBP17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 INTS6LQ5JSJ4 861 aaKnown RBP17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 PEAR1Q5VY43 1037 aaPredicted RBP17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 ADALQ6DHV7 355 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 CRELD2Q6UXH1 353 aaPredicted RBP17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 PDCL2Q8N4E4 241 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 CCDC33Q8N5R6 958 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 FSIP1Q8NA03 581 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 CDK5RAP3Q96JB5 506 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 FREM2Q5SZK8 3169 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 SPAARA0A1B0GVQ0 90 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 C2orf78A6NCI8 922 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 SLC26A4O43511 780 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 CHRM1P11229 460 aaPredicted RBP17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 PFKLP17858 780 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 PTGER3P43115 390 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 SIM1P81133 766 aaPredicted RBP17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 ZXDBP98169 803 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 ZC2HC1CQ53FD0 456 aaPredicted RBP17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 TMEFF1Q8IYR6 380 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 ADGRG2Q8IZP9 1017 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 WHAMMQ8TF30 809 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 RLN3Q8WXF3 142 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 ZNF560Q96MR9 790 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 DDX43Q9NXZ2 648 aaKnown RBP17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 MBD1Q9UIS9 605 aaPredicted RBP17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 PILRBQ9UKJ0 227 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 GTF3C4Q9UKN8 822 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 AGO2Q9UKV8 859 aaKnown RBP17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 L1RE1Q9UN81 338 aa17.98■□□□□ 0.47
CHCHD3-202ENST00000423635 CACNA1EQ15878 2313 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 TCHHQ07283 1943 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 GON4LQ3T8J9 2241 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 MAP3K13O43283 966 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 FAM13AO94988 1023 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 RDXP35241 583 aaKnown RBP17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 HOXD12P35452 270 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 MAPK8P45983 427 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 PDE6CP51160 858 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 KCNB1Q14721 858 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 MAP7D1Q3KQU3 841 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 ARL6IP4Q66PJ3 421 aaKnown RBP17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 LMBRD2Q68DH5 695 aaPredicted RBP17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 GPBP1Q86WP2 473 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 TMEM86AQ8N2M4 240 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 FRMD1Q8N878 549 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 IL17RCQ8NAC3 791 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 TTC16Q8NEE8 873 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 SPATA18Q8TC71 538 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 FUBP3Q96I24 572 aaKnown RBP eCLIP17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 SPACA7Q96KW9 195 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 ST6GALNAC4Q9H4F1 302 aa17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 POLMQ9NP87 494 aaPredicted RBP17.97■□□□□ 0.47
CHCHD3-202ENST00000423635 PI4KAP42356 2102 aa17.96■□□□□ 0.47
CHCHD3-202ENST00000423635 ANAPC1Q9H1A4 1944 aa17.96■□□□□ 0.47
CHCHD3-202ENST00000423635 TNRC6BQ9UPQ9 1833 aaKnown RBP17.96■□□□□ 0.47
CHCHD3-202ENST00000423635 VWA3AA6NCI4 1184 aa17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 MYMKA6NI61 221 aa17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 TISP43B9A030 160 aa17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 IL18RAPO95256 599 aa17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 EIF2DP41214 584 aaKnown RBP17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 MYL7Q01449 175 aa17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 BYSLQ13895 437 aaKnown RBP17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 RILPL1Q5EBL4 403 aa17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 PROSER1Q86XN7 944 aa17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 TXNDC5Q8NBS9 432 aaKnown RBP17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 CEP76Q8TAP6 659 aa17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 ZSCAN31Q96LW9 406 aaPredicted RBP17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 GDAP2Q9NXN4 497 aa17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 SLC6A14Q9UN76 642 aa17.96■□□□□ 0.46
CHCHD3-202ENST00000423635 SGK1O00141 431 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms