RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 ATP8B3O60423 1300 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 F11P03951 625 aa28.1■■■□□ 2.09
CDK9-202ENST00000421939 VIPR2P41587 438 aa28.1■■■□□ 2.09
CDK9-202ENST00000421939 PFKPQ01813 784 aa28.1■■■□□ 2.09
CDK9-202ENST00000421939 INCA1Q0VD86 236 aa28.1■■■□□ 2.09
CDK9-202ENST00000421939 ACOT1Q86TX2 421 aa28.1■■■□□ 2.09
CDK9-202ENST00000421939 ARHGEF3Q9NR81 526 aa28.1■■■□□ 2.09
CDK9-202ENST00000421939 ZMYM5Q9UJ78 669 aa28.1■■■□□ 2.09
CDK9-202ENST00000421939 KMT2EQ8IZD2 1858 aa28.1■■■□□ 2.09
CDK9-202ENST00000421939 NUP210Q8TEM1 1887 aaPredicted RBP28.1■■■□□ 2.09
CDK9-202ENST00000421939 KRBA1A5PL33 1030 aa28.09■■■□□ 2.09
CDK9-202ENST00000421939 F8VP50 259 aa28.09■■■□□ 2.09
CDK9-202ENST00000421939 CLDN5O00501 218 aa28.09■■■□□ 2.09
CDK9-202ENST00000421939 VCPP55072 806 aaKnown RBP28.09■■■□□ 2.09
CDK9-202ENST00000421939 ORC1Q13415 861 aa28.09■■■□□ 2.09
CDK9-202ENST00000421939 GRM2Q14416 872 aa28.09■■■□□ 2.09
CDK9-202ENST00000421939 VITQ6UXI7 678 aa28.09■■■□□ 2.09
CDK9-202ENST00000421939 ARID3BQ8IVW6 561 aaPredicted RBP28.09■■■□□ 2.09
CDK9-202ENST00000421939 DEPDC1BQ8WUY9 529 aa28.09■■■□□ 2.09
CDK9-202ENST00000421939 E2F7Q96AV8 911 aa28.09■■■□□ 2.09
CDK9-202ENST00000421939 FAXDC2Q96IV6 333 aa28.09■■■□□ 2.09
CDK9-202ENST00000421939 C8orf48Q96LL4 319 aa28.09■■■□□ 2.09
CDK9-202ENST00000421939 NUP62CLQ9H1M0 184 aa28.09■■■□□ 2.09
CDK9-202ENST00000421939 NCANO14594 1321 aa28.09■■■□□ 2.09
CDK9-202ENST00000421939 TADA3O75528 432 aa28.08■■■□□ 2.09
CDK9-202ENST00000421939 DDX6P26196 483 aaKnown RBP eCLIP28.08■■■□□ 2.09
CDK9-202ENST00000421939 CACNA2D1P54289 1103 aa28.08■■■□□ 2.09
CDK9-202ENST00000421939 WDR44Q5JSH3 913 aa28.08■■■□□ 2.09
CDK9-202ENST00000421939 CWF19L1Q69YN2 538 aaKnown RBP28.08■■■□□ 2.09
CDK9-202ENST00000421939 DENND5BQ6ZUT9 1274 aa28.08■■■□□ 2.09
CDK9-202ENST00000421939 FAM35AQ86V20 835 aa28.08■■■□□ 2.09
CDK9-202ENST00000421939 FLCNQ8NFG4 579 aa28.08■■■□□ 2.09
CDK9-202ENST00000421939 MRPS31Q92665 395 aaKnown RBP28.08■■■□□ 2.09
CDK9-202ENST00000421939 TMEM30AQ9NV96 361 aa28.08■■■□□ 2.09
CDK9-202ENST00000421939 COQ4Q9Y3A0 265 aa28.08■■■□□ 2.09
CDK9-202ENST00000421939 OBSL1O75147 1896 aa28.08■■■□□ 2.09
CDK9-202ENST00000421939 MUC6Q6W4X9 2439 aa28.08■■■□□ 2.09
CDK9-202ENST00000421939 HEPACAM2A8MVW5 462 aa28.07■■■□□ 2.08
CDK9-202ENST00000421939 PSMC3P17980 439 aa28.07■■■□□ 2.08
CDK9-202ENST00000421939 CD58P19256 250 aa28.07■■■□□ 2.08
CDK9-202ENST00000421939 CRYBG2Q8N1P7 616 aa28.07■■■□□ 2.08
CDK9-202ENST00000421939 RSPRY1Q96DX4 576 aa28.07■■■□□ 2.08
CDK9-202ENST00000421939 MED10Q9BTT4 135 aa28.07■■■□□ 2.08
CDK9-202ENST00000421939 TRMT61BQ9BVS5 477 aaKnown RBP28.07■■■□□ 2.08
CDK9-202ENST00000421939 GREB1Q4ZG55 1949 aa28.07■■■□□ 2.08
CDK9-202ENST00000421939 DENND4CQ5VZ89 1909 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 PRAMEF12O95522 483 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 GNA14O95837 355 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 NPR3P17342 541 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 TRIM21P19474 475 aaKnown RBP28.06■■■□□ 2.08
CDK9-202ENST00000421939 WEE1P30291 646 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 ASTLQ6HA08 431 aaPredicted RBP28.06■■■□□ 2.08
CDK9-202ENST00000421939 MFSD6LQ8IWD5 586 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 FUKQ8N0W3 1084 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 SMARCD1Q96GM5 515 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 TWNKQ96RR1 684 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 NT5C1AQ9BXI3 368 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 SLC46A2Q9BY10 475 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 BRD9Q9H8M2 597 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 EHD2Q9NZN4 543 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 RWDD2AQ9UIY3 292 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 WDFY4Q6ZS81 3184 aa28.06■■■□□ 2.08
CDK9-202ENST00000421939 CILPO75339 1184 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 CCDC130P13994 396 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 RFX1P22670 979 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 AVPR2P30518 371 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 FMO5P49326 533 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 PAQR9Q6ZVX9 377 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 CMTM8Q8IZV2 173 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 MAB21L3Q8N8X9 362 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 MLKLQ8NB16 471 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 DNASE1L2Q92874 299 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 TTLL2Q9BWV7 592 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 TBC1D17Q9HA65 648 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 DMAP1Q9NPF5 467 aaPredicted RBP28.05■■■□□ 2.08
CDK9-202ENST00000421939 KRT82Q9NSB4 513 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 OBP2AQ9NY56 170 aa28.05■■■□□ 2.08
CDK9-202ENST00000421939 SOBPA7XYQ1 873 aa28.04■■■□□ 2.08
CDK9-202ENST00000421939 DPYSL4O14531 572 aa28.04■■■□□ 2.08
CDK9-202ENST00000421939 FGFR1OPO95684 399 aaKnown RBP28.04■■■□□ 2.08
CDK9-202ENST00000421939 GDI1P31150 447 aa28.04■■■□□ 2.08
CDK9-202ENST00000421939 CLCN5P51795 746 aa28.04■■■□□ 2.08
CDK9-202ENST00000421939 USP46P62068 366 aa28.04■■■□□ 2.08
CDK9-202ENST00000421939 MLF2Q15773 248 aaPredicted RBP28.04■■■□□ 2.08
CDK9-202ENST00000421939 IER5LQ5T953 404 aa28.04■■■□□ 2.08
CDK9-202ENST00000421939 TXNDC8Q6A555 127 aa28.04■■■□□ 2.08
CDK9-202ENST00000421939 MON1AQ86VX9 555 aa28.04■■■□□ 2.08
CDK9-202ENST00000421939 GPIHBP1Q8IV16 184 aa28.04■■■□□ 2.08
CDK9-202ENST00000421939 TTC39CQ8N584 583 aa28.04■■■□□ 2.08
CDK9-202ENST00000421939 C12orf29Q8N999 325 aa28.04■■■□□ 2.08
CDK9-202ENST00000421939 SLC2A14Q8TDB8 520 aa28.04■■■□□ 2.08
CDK9-202ENST00000421939 SRRTQ9BXP5 876 aaKnown RBP28.04■■■□□ 2.08
CDK9-202ENST00000421939 FAM49BQ9NUQ9 324 aa28.04■■■□□ 2.08
CDK9-202ENST00000421939 GOLGA6L22H0YM25 854 aa28.03■■■□□ 2.08
CDK9-202ENST00000421939 AP1G2O75843 785 aa28.03■■■□□ 2.08
CDK9-202ENST00000421939 AVPR1AP37288 418 aa28.03■■■□□ 2.08
CDK9-202ENST00000421939 MARSP56192 900 aaKnown RBP28.03■■■□□ 2.08
CDK9-202ENST00000421939 TRIM59Q8IWR1 403 aa28.03■■■□□ 2.08
CDK9-202ENST00000421939 YAF2Q8IY57 180 aa28.03■■■□□ 2.08
CDK9-202ENST00000421939 TMEM105Q8N8V8 129 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms