RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 VARS2Q5ST30 1063 aaKnown RBP15.07■□□□□ 0
SHMT1P1-201ENST00000419974 PPP1R15BQ5SWA1 713 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 SLC8B1Q6J4K2 584 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 C4orf50Q6ZRC1 276 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 DDX53Q86TM3 631 aaKnown RBP15.07■□□□□ 0
SHMT1P1-201ENST00000419974 HERC6Q8IVU3 1022 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 DCP1BQ8IZD4 617 aaKnown RBP15.07■□□□□ 0
SHMT1P1-201ENST00000419974 SYCE1Q8N0S2 351 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 COLGALT1Q8NBJ5 622 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 C3orf20Q8ND61 904 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 C1orf131Q8NDD1 294 aaKnown RBP15.07■□□□□ 0
SHMT1P1-201ENST00000419974 OR10T2Q8NGX3 314 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 SLC2A14Q8TDB8 520 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 FNIP1Q8TF40 1166 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 PIK3R5Q8WYR1 880 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 C18orf8Q96DM3 657 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 PCED1BQ96HM7 432 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 C16orf45Q96MC5 204 aaPredicted RBP15.07■□□□□ 0
SHMT1P1-201ENST00000419974 TUBB2BQ9BVA1 445 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 SPG21Q9NZD8 308 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 CXXC1Q9P0U4 656 aaPredicted RBP15.07■□□□□ 0
SHMT1P1-201ENST00000419974 HSFX1Q9UBD0 423 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 CYTH4Q9UIA0 394 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 RWDD3Q9Y3V2 267 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 JRKLQ9Y4A0 524 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 TIMM13Q9Y5L4 95 aaPredicted RBP15.07■□□□□ 0
SHMT1P1-201ENST00000419974 MRPL42Q9Y6G3 142 aaKnown RBP15.07■□□□□ 0
SHMT1P1-201ENST00000419974 MYBPHLA2RUH7 354 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 TMCO5BA8MYB1 307 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 I3L4J1 428 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 SOD2P04179 222 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 PRLRP16471 622 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 TKTP29401 623 aaKnown RBP15.06■□□□□ 0
SHMT1P1-201ENST00000419974 MAGEA11P43364 429 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 GNG11P61952 73 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 ORC1Q13415 861 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 MAMLD1Q13495 774 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 RAB30Q15771 203 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 PTPN20Q4JDL3 420 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 FAM171A1Q5VUB5 890 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 ZNF280DQ6N043 979 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 C11orf63Q6NUN7 778 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 PASD1Q8IV76 773 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 TPCN2Q8NHX9 752 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 KIF18AQ8NI77 898 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 HASPINQ8TF76 798 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 TIFAQ96CG3 184 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 ARHGEF26Q96DR7 871 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 MCRS1Q96EZ8 462 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 SMARCD1Q96GM5 515 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 FAM161BQ96MY7 647 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 CPXM1Q96SM3 734 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 HERC2P3Q9BVR0 1158 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 B3GNT5Q9BYG0 378 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 PBX4Q9BYU1 374 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 IRX2Q9BZI1 471 aaPredicted RBP15.06■□□□□ 0
SHMT1P1-201ENST00000419974 CNOT8Q9UFF9 292 aaKnown RBP15.06■□□□□ 0
SHMT1P1-201ENST00000419974 MAFFQ9ULX9 164 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 TFR2Q9UP52 801 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 LZTS1Q9Y250 596 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 PAXBP1Q9Y5B6 917 aa15.06■□□□□ 0
SHMT1P1-201ENST00000419974 SIGLEC16A6NMB1 481 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 HCRTO43612 131 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 ATP2C2O75185 946 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 C1RP00736 705 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 ATP2A2P16615 1042 aaKnown RBP15.05■□□□□ -0
SHMT1P1-201ENST00000419974 ABCB4P21439 1286 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 RRM1P23921 792 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 DSG1Q02413 1049 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 PDE4CQ08493 712 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 GPR17Q13304 367 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 RAB41Q5JT25 222 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 VSTM1Q6UX27 236 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 MMS22LQ6ZRQ5 1243 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 TMEM173Q86WV6 379 aaPredicted RBP15.05■□□□□ -0
SHMT1P1-201ENST00000419974 XYLT1Q86Y38 959 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 FIBCD1Q8N539 461 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 IPO4Q8TEX9 1081 aaKnown RBP15.05■□□□□ -0
SHMT1P1-201ENST00000419974 BCL7CQ8WUZ0 217 aaPredicted RBP15.05■□□□□ -0
SHMT1P1-201ENST00000419974 ZNF653Q96CK0 615 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 PLVAPQ9BX97 442 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 ZNF576Q9H609 170 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 RRAGDQ9NQL2 400 aaPredicted RBP15.05■□□□□ -0
SHMT1P1-201ENST00000419974 HCSTQ9UBK5 93 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 MTRRQ9UBK8 725 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 MSRAQ9UJ68 235 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 COG5Q9UP83 839 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 SSX2IPQ9Y2D8 614 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 PCDHB12Q9Y5F1 795 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 CAPN6Q9Y6Q1 641 aa15.05■□□□□ -0
SHMT1P1-201ENST00000419974 A0A0C4DFX4 3053 aa15.04■□□□□ -0
SHMT1P1-201ENST00000419974 MACROD2A1Z1Q3 448 aa15.04■□□□□ -0
SHMT1P1-201ENST00000419974 GRID2IPA4D2P6 1211 aa15.04■□□□□ -0
SHMT1P1-201ENST00000419974 TMEM191CA6NGB0 347 aa15.04■□□□□ -0
SHMT1P1-201ENST00000419974 ZBBXA8MT70 800 aa15.04■□□□□ -0
SHMT1P1-201ENST00000419974 C5orf67F2Z3F1 127 aa15.04■□□□□ -0
SHMT1P1-201ENST00000419974 FAM200BP0CF97 657 aa15.04■□□□□ -0
SHMT1P1-201ENST00000419974 CCDC130P13994 396 aa15.04■□□□□ -0
SHMT1P1-201ENST00000419974 ACAT1P24752 427 aaKnown RBP15.04■□□□□ -0
SHMT1P1-201ENST00000419974 MAN1A1P33908 653 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms