RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 CNPY4Q8N129 248 aa15.29■□□□□ 0.04
HLA-DPA1-242ENST00000419277 ZNF668Q96K58 619 aaPredicted RBP15.29■□□□□ 0.04
HLA-DPA1-242ENST00000419277 CFAP57Q96MR6 1250 aa15.29■□□□□ 0.04
HLA-DPA1-242ENST00000419277 PTPN18Q99952 460 aa15.29■□□□□ 0.04
HLA-DPA1-242ENST00000419277 HERPUD2Q9BSE4 406 aa15.29■□□□□ 0.04
HLA-DPA1-242ENST00000419277 CCDC134Q9H6E4 229 aa15.29■□□□□ 0.04
HLA-DPA1-242ENST00000419277 SETD4Q9NVD3 440 aa15.29■□□□□ 0.04
HLA-DPA1-242ENST00000419277 GDAP2Q9NXN4 497 aa15.29■□□□□ 0.04
HLA-DPA1-242ENST00000419277 FETUBQ9UGM5 382 aa15.29■□□□□ 0.04
HLA-DPA1-242ENST00000419277 TRAPPC3O43617 180 aa15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 CAND2O75155 1236 aa15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 ZNF865P0CJ78 1059 aaPredicted RBP15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 TSHRP16473 764 aa15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 FGFR4P22455 802 aa15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 CRYBB1P53674 252 aaPredicted RBP15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 CDH8P55286 799 aa15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 BOLA3Q53S33 107 aa15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 FAM102AQ5T9C2 384 aaPredicted RBP15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 TWNKQ96RR1 684 aa15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 FRMD8Q9BZ67 464 aaPredicted RBP15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 AAASQ9NRG9 546 aa15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 BCCIPQ9P287 314 aaKnown RBP eCLIP15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 LGALS13Q9UHV8 139 aa15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 TPX2Q9ULW0 747 aaKnown RBP15.28■□□□□ 0.04
HLA-DPA1-242ENST00000419277 C3orf70A6NLC5 250 aaPredicted RBP15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 C2CD4BA6NLJ0 364 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 GOLGA8SH3BPF8 625 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 DYNC1LI2O43237 492 aaPredicted RBP15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 KDELR1P24390 212 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 STIP1P31948 543 aaKnown RBP15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 ACADSBP45954 432 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 PSEN2P49810 448 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 GUCY1A3Q02108 690 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 SV2CQ496J9 727 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 PKDCCQ504Y2 493 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 FBXO47Q5MNV8 452 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 C4orf22Q6V702 233 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 TMEM110Q86TL2 294 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 CCDC25Q86WR0 208 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 HACE1Q8IYU2 909 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 P3H4Q92791 437 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 KAT2BQ92831 832 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 ZBTB10Q96DT7 871 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 SLC4A5Q9BY07 1137 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 SENP1Q9P0U3 644 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 CYTH4Q9UIA0 394 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 DNPEPQ9ULA0 475 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 USP18Q9UMW8 372 aa15.27■□□□□ 0.04
HLA-DPA1-242ENST00000419277 SCN1AP35498 2009 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 CFAP69A5D8W1 941 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 GMNCA6NCL1 334 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 MCF2LO15068 1137 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 MDM4O15151 490 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 BCAT1P54687 386 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 CBLBQ13191 982 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 P3H1Q32P28 736 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 ANKS1BQ7Z6G8 1248 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 NLRP14Q86W24 1093 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 MYCBPAPQ8TBZ2 947 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 RAPGEF5Q92565 580 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 TNIP3Q96KP6 325 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 HMGXB4Q9UGU5 601 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 A0A087WUV0 522 aaPredicted RBP15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 PRPSAP2O60256 369 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 RECQL4O94761 1208 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 ENDOD1O94919 500 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 IGHA2P01877 340 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 SHBGP04278 402 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 SSTR3P32745 418 aaPredicted RBP15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 RPL34P49207 117 aaKnown RBP15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 ARSEP51690 589 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 SNX17Q15036 470 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 TAF1CQ15572 869 aaPredicted RBP15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 C9orf57Q5W0N0 161 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 KAZNQ674X7 775 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 SCARA3Q6AZY7 606 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 CENPUQ71F23 418 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 TDRPQ86YL5 185 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 CRYBG2Q8N1P7 616 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 RBM15Q96T37 977 aaKnown RBP eCLIP15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 UBN1Q9NPG3 1134 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 SNTG2Q9NY99 539 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 RSPH14Q9UHP6 348 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 SNX9Q9Y5X1 595 aa15.26■□□□□ 0.03
HLA-DPA1-242ENST00000419277 C17orf102A2RUQ5 167 aa15.25■□□□□ 0.03
HLA-DPA1-242ENST00000419277 C5orf60A6NFR6 353 aa15.25■□□□□ 0.03
HLA-DPA1-242ENST00000419277 PIRO00625 290 aa15.25■□□□□ 0.03
HLA-DPA1-242ENST00000419277 CSDE1O75534 798 aaKnown RBP15.25■□□□□ 0.03
HLA-DPA1-242ENST00000419277 GJB6O95452 261 aa15.25■□□□□ 0.03
HLA-DPA1-242ENST00000419277 TRUB2O95900 331 aaKnown RBP15.25■□□□□ 0.03
HLA-DPA1-242ENST00000419277 AKR1A1P14550 325 aa15.25■□□□□ 0.03
HLA-DPA1-242ENST00000419277 TGM2P21980 687 aa15.25■□□□□ 0.03
HLA-DPA1-242ENST00000419277 PAX3P23760 479 aa15.25■□□□□ 0.03
HLA-DPA1-242ENST00000419277 MIPP30301 263 aa15.25■□□□□ 0.03
HLA-DPA1-242ENST00000419277 PTPN9P43378 593 aa15.25■□□□□ 0.03
HLA-DPA1-242ENST00000419277 TAF6P49848 677 aa15.25■□□□□ 0.03
HLA-DPA1-242ENST00000419277 HUNKP57058 714 aa15.25■□□□□ 0.03
HLA-DPA1-242ENST00000419277 SLC8A3P57103 927 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms