RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 MXI1P50539 228 aa21.64■■□□□ 1.05
GTF3A-202ENST00000419181 NUBP1P53384 320 aa21.64■■□□□ 1.05
GTF3A-202ENST00000419181 PTPN5P54829 565 aa21.64■■□□□ 1.05
GTF3A-202ENST00000419181 STARD6P59095 220 aa21.64■■□□□ 1.05
GTF3A-202ENST00000419181 SLC44A4Q53GD3 710 aa21.64■■□□□ 1.05
GTF3A-202ENST00000419181 FOXR2Q6PJQ5 311 aa21.64■■□□□ 1.05
GTF3A-202ENST00000419181 MFSD6LQ8IWD5 586 aa21.64■■□□□ 1.05
GTF3A-202ENST00000419181 DNASE1L2Q92874 299 aa21.64■■□□□ 1.05
GTF3A-202ENST00000419181 TNIP3Q96KP6 325 aa21.64■■□□□ 1.05
GTF3A-202ENST00000419181 SLC46A2Q9BY10 475 aa21.64■■□□□ 1.05
GTF3A-202ENST00000419181 B3GNT5Q9BYG0 378 aa21.64■■□□□ 1.05
GTF3A-202ENST00000419181 ZNF518BQ9C0D4 1074 aa21.64■■□□□ 1.05
GTF3A-202ENST00000419181 ELOVL4Q9GZR5 314 aa21.64■■□□□ 1.05
GTF3A-202ENST00000419181 ANAPC1Q9H1A4 1944 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 TRIM66O15016 1216 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 PI15O43692 258 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 LRRN2O75325 713 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 PRAMEF12O95522 483 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 PRKCQQ04759 706 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 MLF2Q15773 248 aaPredicted RBP21.63■■□□□ 1.05
GTF3A-202ENST00000419181 KLHL10Q6JEL2 608 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 TTI2Q6NXR4 508 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 CLEC17AQ6ZS10 378 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 UNC93AQ86WB7 457 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 SHDQ96IW2 340 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 C8orf48Q96LL4 319 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 DDX23Q9BUQ8 820 aaKnown RBP21.63■■□□□ 1.05
GTF3A-202ENST00000419181 NIF3L1Q9GZT8 377 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 BRD9Q9H8M2 597 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.63■■□□□ 1.05
GTF3A-202ENST00000419181 TMEM30AQ9NV96 361 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 OBP2AQ9NY56 170 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 HMGXB4Q9UGU5 601 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 ZNF638Q14966 1978 aaKnown RBP21.63■■□□□ 1.05
GTF3A-202ENST00000419181 TICRRQ7Z2Z1 1910 aa21.63■■□□□ 1.05
GTF3A-202ENST00000419181 SOBPA7XYQ1 873 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 F8VP50 259 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 RFX1P22670 979 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 DDX6P26196 483 aaKnown RBP eCLIP21.62■■□□□ 1.05
GTF3A-202ENST00000419181 ANXA13P27216 316 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 GDI1P31150 447 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 NDST1P52848 882 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 CACNA2D1P54289 1103 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 FCHO2Q0JRZ9 810 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 INCA1Q0VD86 236 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 DCAF17Q5H9S7 520 aaPredicted RBP21.62■■□□□ 1.05
GTF3A-202ENST00000419181 ACOT1Q86TX2 421 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 GPIHBP1Q8IV16 184 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 CMTM8Q8IZV2 173 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 CRYBG2Q8N1P7 616 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 TRIML1Q8N9V2 468 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 FBXL13Q8NEE6 735 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 NELFBQ8WX92 580 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 MRPS31Q92665 395 aaKnown RBP21.62■■□□□ 1.05
GTF3A-202ENST00000419181 SEMA4DQ92854 862 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 IRF7Q92985 503 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 CEP63Q96MT8 703 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 DUSP9Q99956 384 aaKnown RBP21.62■■□□□ 1.05
GTF3A-202ENST00000419181 CYP3A43Q9HB55 503 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 TRPV5Q9NQA5 729 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 KIAA1468Q9P260 1216 aa21.62■■□□□ 1.05
GTF3A-202ENST00000419181 ARMCX3Q9UH62 379 aaPredicted RBP21.62■■□□□ 1.05
GTF3A-202ENST00000419181 KIF26AQ9ULI4 1882 aaPredicted RBP21.62■■□□□ 1.05
GTF3A-202ENST00000419181 ARNTLO00327 626 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 CLDN5O00501 218 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 STK25O00506 426 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 CAMK4Q16566 473 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 CBWD6Q4V339 395 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 CBWD3Q5JTY5 395 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 CBWD5Q5RIA9 395 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 TCERG1LQ5VWI1 586 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 TXNDC8Q6A555 127 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 DENND5BQ6ZUT9 1274 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 PAQR9Q6ZVX9 377 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 FAM35AQ86V20 835 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 MON1AQ86VX9 555 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 MAB21L3Q8N8X9 362 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 CCDC150Q8NCX0 1101 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 SLC35C1Q96A29 364 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 LRRC3BQ96PB8 259 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 TTLL2Q9BWV7 592 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 HEBP1Q9NRV9 189 aa21.61■■□□□ 1.05
GTF3A-202ENST00000419181 F5P12259 2224 aa21.6■■□□□ 1.05
GTF3A-202ENST00000419181 BICDL2A1A5D9 508 aa21.6■■□□□ 1.05
GTF3A-202ENST00000419181 DPYSL4O14531 572 aa21.6■■□□□ 1.05
GTF3A-202ENST00000419181 ZNF263O14978 683 aa21.6■■□□□ 1.05
GTF3A-202ENST00000419181 GALR2O43603 387 aaPredicted RBP21.6■■□□□ 1.05
GTF3A-202ENST00000419181 HOXD11P31277 338 aaPredicted RBP21.6■■□□□ 1.05
GTF3A-202ENST00000419181 USP46P62068 366 aa21.6■■□□□ 1.05
GTF3A-202ENST00000419181 TCF15Q12870 199 aa21.6■■□□□ 1.05
GTF3A-202ENST00000419181 ORC1Q13415 861 aa21.6■■□□□ 1.05
GTF3A-202ENST00000419181 FILIP1Q7Z7B0 1213 aa21.6■■□□□ 1.05
GTF3A-202ENST00000419181 FAXDC2Q96IV6 333 aa21.6■■□□□ 1.05
GTF3A-202ENST00000419181 SMG9Q9H0W8 520 aaKnown RBP21.6■■□□□ 1.05
GTF3A-202ENST00000419181 METTL14Q9HCE5 456 aaKnown RBP21.6■■□□□ 1.05
GTF3A-202ENST00000419181 RAB20Q9NX57 234 aa21.6■■□□□ 1.05
GTF3A-202ENST00000419181 CTNND2Q9UQB3 1225 aa21.6■■□□□ 1.05
GTF3A-202ENST00000419181 COQ4Q9Y3A0 265 aa21.6■■□□□ 1.05
GTF3A-202ENST00000419181 MIA3Q5JRA6 1907 aa21.6■■□□□ 1.05
GTF3A-202ENST00000419181 ATP8B3O60423 1300 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms