RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 CCDC50Q8IVM0 306 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 SPATA18Q8TC71 538 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 FBXO25Q8TCJ0 367 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 SLC35F5Q8WV83 523 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 C1orf54Q8WWF1 131 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 WNT8BQ93098 351 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 NKD2Q969F2 451 aaPredicted RBP9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 NCAPGQ9BPX3 1015 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 DNAI2Q9GZS0 605 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 FAM204AQ9H8W3 233 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 MTRF1LQ9UGC7 380 aaKnown RBP9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 PLAAQ9Y263 795 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 DRG1Q9Y295 367 aaKnown RBP9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 SNX24Q9Y343 169 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 SQORQ9Y6N5 450 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 ZNF638Q14966 1978 aaKnown RBP9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 GRIN2DO15399 1336 aa9.53□□□□□ -0.88
LINCMD1-201ENST00000418518 GOLGA6CA6NDK9 693 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 ZNF487B1APH4 448 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 E5RJQ4 531 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 GABRDO14764 452 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 INPPL1O15357 1258 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 LIASO43766 372 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 SHOX2O60902 331 aaPredicted RBP9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 CAND2O75155 1236 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 GABBR2O75899 941 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 CABYRO75952 493 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 TJP3O95049 919 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 PGK1P00558 417 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 CHRNA1P02708 482 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 GOLGA6DP0CG33 693 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 FGFR1P11362 822 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 ITIH2P19823 946 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 GPD1P21695 349 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 KLRC2P26717 231 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 IL1R2P27930 398 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 RAB27AP51159 221 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 ARSEP51690 589 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 BCAT1P54687 386 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 EIF3BP55884 814 aaKnown RBP9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 SNX16P57768 344 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 SKOR1P84550 965 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 SP3Q02447 781 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 LMNB2Q03252 620 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 DHX9Q08211 1270 aaKnown RBP9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 BST2Q10589 180 aaKnown RBP9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 TRIM32Q13049 653 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 SLMAPQ14BN4 828 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 OASLQ15646 514 aaKnown RBP9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 TRIM71Q2Q1W2 868 aaKnown RBP9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 ATP13A4Q4VNC1 1196 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 TFDP3Q5H9I0 405 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 FAM102AQ5T9C2 384 aaPredicted RBP9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 AGBL2Q5U5Z8 902 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 TXNRD3NBQ6F5E7 133 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 TWF2Q6IBS0 349 aaKnown RBP9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 CYP4F22Q6NT55 531 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 TRNP1Q6NT89 227 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 CYP4V2Q6ZWL3 525 aaPredicted RBP9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 SLC26A9Q7LBE3 791 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 ACOT1Q86TX2 421 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 HACE1Q8IYU2 909 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 C12orf29Q8N999 325 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 ANKRD52Q8NB46 1076 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 GSTCDQ8NEC7 633 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 CMASQ8NFW8 434 aaPredicted RBP9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 FAM76AQ8TAV0 307 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 SLC35B2Q8TB61 432 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 CCHCR1Q8TD31 782 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 TEKT4Q8WW24 435 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 ATG4AQ8WYN0 398 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 RAPGEF5Q92565 580 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 KHSRPQ92945 711 aaKnown RBP eCLIP9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 ARL8AQ96BM9 186 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 SNF8Q96H20 258 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 TMEM109Q9BVC6 243 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 APOL6Q9BWW8 343 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 FOXP3Q9BZS1 431 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 TRIM31Q9BZY9 425 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 TSPYL1Q9H0U9 437 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 SYNCQ9H7C4 482 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 TMBIM4Q9HC24 238 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 XPNPEP3Q9NQH7 507 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 FAM105AQ9NUU6 356 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 SLC38A7Q9NVC3 462 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 ASNSD1Q9NWL6 643 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 GOLGA6AQ9NYA3 693 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 HESX1Q9UBX0 185 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 ST3GAL5Q9UNP4 418 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 GIT1Q9Y2X7 761 aa9.52□□□□□ -0.89
LINCMD1-201ENST00000418518 LRRD1A4D1F6 860 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 A8MXQ7 604 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 HMGB1P1B2RPK0 211 aaPredicted RBP9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 PI4K2BG5E9Z4 385 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 GPR182O15218 404 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 PAPSS1O43252 624 aaPredicted RBP9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 TRUB2O95900 331 aaKnown RBP9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 ITGAVP06756 1048 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 ASGR1P07306 291 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 RARGP13631 454 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms