RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	TMEM176A	Q96HP8	235 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	ABHD16B	Q9H3Z7	469 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	TRIM49D1	C9J1S8	452 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	TH	P07101	528 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	SOX11	P35716	441 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	ALDH18A1	P54886	795 aa	Known RBP	13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	MAP3K7CL	P57077	242 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	NFIL3	Q16649	462 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	TFDP3	Q5H9I0	405 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	WDR49	Q8IV35	697 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	SCUBE3	Q8IX30	993 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	DDIAS	Q8IXT1	998 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	EDEM1	Q92611	657 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	KRT35	Q92764	455 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	RPRD1A	Q96P16	312 aa	Predicted RBP	13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	MRI	Q9BWK5	157 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	FGFBP2	Q9BYJ0	223 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	TSPAN16	Q9UKR8	245 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	RPS6KL1	Q9Y6S9	549 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	LOC100653049	A0A140TA62	436 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	GSTA4	O15217	222 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	KRT34	O76011	436 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	SPATA31C1	P0DKV0	1188 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	FNTA	P49354	379 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	FCGRT	P55899	365 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	WDR93	Q6P2C0	686 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	ADAM32	Q8TC27	787 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	MIEF2	Q96C03	454 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	ERP27	Q96DN0	273 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	HSD17B14	Q9BPX1	270 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	TRIM62	Q9BVG3	475 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	PIH1D1	Q9NWS0	290 aa	Known RBP	13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	UBP1	Q9NZI7	540 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	RIPK3	Q9Y572	518 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	RCCD1	A6NED2	376 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	ACKR2	O00590	384 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	DNAJC6	O75061	913 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	CYP3A4	P08684	503 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	PRLR	P16471	622 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	PNPLA4	P41247	253 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	RAD51	Q06609	339 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	OVGP1	Q12889	678 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	MYBPC2	Q14324	1141 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	KRT80	Q6KB66	452 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	LVRN	Q6Q4G3	990 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	LRRC6	Q86X45	466 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	MCOLN2	Q8IZK6	566 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	RNF217	Q8TC41	542 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	SERPINI1	Q99574	410 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	TSSK1B	Q9BXA7	367 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	UPF3A	Q9H1J1	476 aa	Known RBP	13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	USP18	Q9UMW8	372 aa		13.78	□□□□□ -0.2
BDNF-208	ENST00000418212	CAND2	O75155	1236 aa		13.77	□□□□□ -0.2
BDNF-208	ENST00000418212	KRT4	P19013	534 aa		13.77	□□□□□ -0.2
BDNF-208	ENST00000418212	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.77	□□□□□ -0.2
BDNF-208	ENST00000418212	AADACL2	Q6P093	401 aa		13.77	□□□□□ -0.2
BDNF-208	ENST00000418212	WDR59	Q6PJI9	974 aa		13.77	□□□□□ -0.2
BDNF-208	ENST00000418212	ADGRF2	Q8IZF7	708 aa		13.77	□□□□□ -0.2
BDNF-208	ENST00000418212	KIF2B	Q8N4N8	673 aa		13.77	□□□□□ -0.2
BDNF-208	ENST00000418212	ECT2	Q9H8V3	914 aa		13.77	□□□□□ -0.2
BDNF-208	ENST00000418212	LATS2	Q9NRM7	1088 aa		13.77	□□□□□ -0.2
BDNF-208	ENST00000418212	STK25	O00506	426 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	SKI	P12755	728 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	ATXN3	P54252	364 aa	Predicted RBP	13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	KCNMA1	Q12791	1236 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	RABGAP1L	Q5R372	815 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	MAP4K3	Q8IVH8	894 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	SAMD3	Q8N6K7	520 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	ZBTB10	Q96DT7	871 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	TMEM169	Q96HH4	297 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	FAM167B	Q9BTA0	163 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	SHCBP1L	Q9BZQ2	653 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	MUC3B	Q9H195	1237 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	TASP1	Q9H6P5	420 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	YDJC	A8MPS7	323 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	PDE2A	O00408	941 aa	Predicted RBP	13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	HADHA	P40939	763 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	FSCB	Q5H9T9	825 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	CATSPERG	Q6ZRH7	1159 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	PPIL6	Q8IXY8	311 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	KIAA0319L	Q8IZA0	1049 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	DCP1B	Q8IZD4	617 aa	Known RBP	13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	DTX3L	Q8TDB6	740 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	ASAP3	Q8TDY4	903 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	CDC42EP4	Q9H3Q1	356 aa	Known RBP	13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	SLC39A10	Q9ULF5	831 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	PPP2R3B	Q9Y5P8	575 aa		13.77	□□□□□ -0.21
BDNF-208	ENST00000418212	ENO1	P06733	434 aa	Known RBP	13.76	□□□□□ -0.21
BDNF-208	ENST00000418212	SNRPA	P09012	282 aa	Known RBP	13.76	□□□□□ -0.21
BDNF-208	ENST00000418212	EEF1B2	P24534	225 aa	Known RBP	13.76	□□□□□ -0.21
BDNF-208	ENST00000418212	STIP1	P31948	543 aa	Known RBP	13.76	□□□□□ -0.21
BDNF-208	ENST00000418212	ALDH7A1	P49419	539 aa	Known RBP	13.76	□□□□□ -0.21
BDNF-208	ENST00000418212	CENPC	Q03188	943 aa		13.76	□□□□□ -0.21
BDNF-208	ENST00000418212	STX3	Q13277	289 aa		13.76	□□□□□ -0.21
BDNF-208	ENST00000418212	CLEC16A	Q2KHT3	1053 aa		13.76	□□□□□ -0.21
BDNF-208	ENST00000418212	DENND5B	Q6ZUT9	1274 aa		13.76	□□□□□ -0.21
BDNF-208	ENST00000418212	ETNPPL	Q8TBG4	499 aa		13.76	□□□□□ -0.21
BDNF-208	ENST00000418212	CNPY3	Q9BT09	278 aa		13.76	□□□□□ -0.21
BDNF-208	ENST00000418212	SMG5	Q9UPR3	1016 aa	Known RBP	13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms