RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 USP4Q13107 963 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 ADAM9Q13443 819 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 EDRF1Q3B7T1 1238 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 COBLL1Q53SF7 1204 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 ASTLQ6HA08 431 aaPredicted RBP10.9□□□□□ -0.66
HDLBP-206ENST00000417540 TXNDC11Q6PKC3 985 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 INTS8Q75QN2 995 aaKnown RBP10.9□□□□□ -0.66
HDLBP-206ENST00000417540 RTL10Q7L3V2 364 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 MAB21L3Q8N8X9 362 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 C12orf29Q8N999 325 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 TTC16Q8NEE8 873 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 ZMIZ2Q8NF64 920 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 MYCBPAPQ8TBZ2 947 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 WHAMMQ8TF30 809 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 C2orf15Q8WU43 125 aaKnown RBP10.9□□□□□ -0.66
HDLBP-206ENST00000417540 NELFBQ8WX92 580 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 KAT5Q92993 513 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 ELSPBP1Q96BH3 223 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 BCO2Q9BYV7 579 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 ELOVL4Q9GZR5 314 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 SNX25Q9H3E2 840 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 TMEM8AQ9HCN3 771 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 ABCB6Q9NP58 842 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 RMND1Q9NWS8 449 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 GDE1Q9NZC3 331 aa10.9□□□□□ -0.66
HDLBP-206ENST00000417540 WDR87Q6ZQQ6 2873 aa10.9□□□□□ -0.67
HDLBP-206ENST00000417540 ATG2BQ96BY7 2078 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 F5P12259 2224 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 SLC16A3O15427 465 aaKnown RBP10.89□□□□□ -0.67
HDLBP-206ENST00000417540 SMC2O95347 1197 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 ARSAP15289 507 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 PTPN1P18031 435 aaKnown RBP10.89□□□□□ -0.67
HDLBP-206ENST00000417540 CCNE1P24864 410 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 ADORA2BP29275 332 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 PSMC2P35998 433 aaKnown RBP10.89□□□□□ -0.67
HDLBP-206ENST00000417540 UBE2HP62256 183 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 ZXDBP98169 803 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 NFE2Q16621 373 aaPredicted RBP10.89□□□□□ -0.67
HDLBP-206ENST00000417540 ZNF394Q53GI3 561 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 TCERG1LQ5VWI1 586 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 ITIH5Q86UX2 942 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 ARID3BQ8IVW6 561 aaPredicted RBP10.89□□□□□ -0.67
HDLBP-206ENST00000417540 FUKQ8N0W3 1084 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 PJA1Q8NG27 643 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 SPATA18Q8TC71 538 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 SLC2A14Q8TDB8 520 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 USP13Q92995 863 aaPredicted RBP10.89□□□□□ -0.67
HDLBP-206ENST00000417540 SLC35C1Q96A29 364 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 GSDMAQ96QA5 445 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 GCNAQ96QF7 691 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 SLC46A2Q9BY10 475 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 NIF3L1Q9GZT8 377 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 DLGAP2Q9P1A6 1054 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 HSFX1Q9UBD0 423 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 MAFFQ9ULX9 164 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 R3HCC1Q9Y3T6 440 aaKnown RBP10.89□□□□□ -0.67
HDLBP-206ENST00000417540 ZFP37Q9Y6Q3 630 aaPredicted RBP10.89□□□□□ -0.67
HDLBP-206ENST00000417540 CACNA1IQ9P0X4 2223 aa10.89□□□□□ -0.67
HDLBP-206ENST00000417540 ANTXRLA6NF34 631 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 OTOL1A6NHN0 477 aaPredicted RBP10.88□□□□□ -0.67
HDLBP-206ENST00000417540 H0Y858 1186 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 ZNF197O14709 1029 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 MAPK13O15264 365 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 KRT13P13646 458 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 CDC25CP30307 473 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 ATICP31939 592 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 GNL1P36915 607 aaPredicted RBP10.88□□□□□ -0.67
HDLBP-206ENST00000417540 GRIK1P39086 918 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 MAGEA11P43364 429 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 TUFMP49411 452 aaKnown RBP10.88□□□□□ -0.67
HDLBP-206ENST00000417540 SLC5A3P53794 718 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 APBA1Q02410 837 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 INCA1Q0VD86 236 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 LRMPQ12912 555 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 UBXN2BQ14CS0 331 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 ZNF77Q15935 545 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 DPCR1Q3MIW9 517 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 C4orf50Q6ZRC1 276 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 DPH6Q7L8W6 267 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 LEMD2Q8NC56 503 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 TATDN2Q93075 761 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 FUBP3Q96I24 572 aaKnown RBP eCLIP10.88□□□□□ -0.67
HDLBP-206ENST00000417540 KCNK16Q96T55 309 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 TSG101Q99816 390 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 SMOQ99835 787 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 MED10Q9BTT4 135 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 DDX23Q9BUQ8 820 aaKnown RBP10.88□□□□□ -0.67
HDLBP-206ENST00000417540 CLSTN2Q9H4D0 955 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 BRD9Q9H8M2 597 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 TRPV4Q9HBA0 871 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 ZFP14Q9HCL3 533 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 LTB4R2Q9NPC1 389 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 HPS4Q9NQG7 708 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 RBM12Q9NTZ6 932 aaKnown RBP10.88□□□□□ -0.67
HDLBP-206ENST00000417540 GMIPQ9P107 970 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 MAGEC2Q9UBF1 373 aaPredicted RBP10.88□□□□□ -0.67
HDLBP-206ENST00000417540 AJAP1Q9UKB5 411 aaPredicted RBP10.88□□□□□ -0.67
HDLBP-206ENST00000417540 NDRG2Q9UN36 371 aaKnown RBP10.88□□□□□ -0.67
HDLBP-206ENST00000417540 ASB3Q9Y575 518 aa10.88□□□□□ -0.67
HDLBP-206ENST00000417540 PSMA7O14818 248 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms