RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 FAM35AQ86V20 835 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 ARHGEF19Q8IW93 802 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 DHX40Q8IX18 779 aaKnown RBP24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 C12orf29Q8N999 325 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 ITFG1Q8TB96 612 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 SLC2A14Q8TDB8 520 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 GPR152Q8TDT2 470 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 HNRNPABQ99729 332 aaKnown RBP24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 FAM49BQ9NUQ9 324 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 UXTQ9UBK9 157 aaPredicted RBP24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 CDH7Q9ULB5 785 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 PCDHB4Q9Y5E5 795 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 BDP1A6H8Y1 2624 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 NCOR1O75376 2440 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 LRRC10BA6NIK2 292 aa24.51■■□□□ 1.51
SMARCB1-205ENST00000417137 ZNF18P17022 549 aa24.51■■□□□ 1.51
SMARCB1-205ENST00000417137 TPM4P67936 248 aa24.51■■□□□ 1.51
SMARCB1-205ENST00000417137 SDHAF4Q5VUM1 108 aa24.51■■□□□ 1.51
SMARCB1-205ENST00000417137 FUKQ8N0W3 1084 aa24.51■■□□□ 1.51
SMARCB1-205ENST00000417137 SLC4A11Q8NBS3 891 aa24.51■■□□□ 1.51
SMARCB1-205ENST00000417137 GCNAQ96QF7 691 aa24.51■■□□□ 1.51
SMARCB1-205ENST00000417137 LRRC3Q9BY71 257 aa24.51■■□□□ 1.51
SMARCB1-205ENST00000417137 EPS15L1Q9UBC2 864 aa24.51■■□□□ 1.51
SMARCB1-205ENST00000417137 APEX2Q9UBZ4 518 aa24.51■■□□□ 1.51
SMARCB1-205ENST00000417137 SLC38A8A6NNN8 435 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 F8VP50 259 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 AP1G2O75843 785 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 LAMP2P13473 410 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 CCDC130P13994 396 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 CDC25CP30307 473 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 SLC5A9Q2M3M2 681 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 PRSS36Q5K4E3 855 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 SMYD5Q6GMV2 418 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 TMEM270Q6UE05 265 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 PAQR9Q6ZVX9 377 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 UBR7Q8N806 425 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 FGF13Q92913 245 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 MYADMQ96S97 322 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 GPR88Q9GZN0 384 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 DMAP1Q9NPF5 467 aaPredicted RBP24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 GDE1Q9NZC3 331 aa24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 MAGED2Q9UNF1 606 aaPredicted RBP24.5■■□□□ 1.51
SMARCB1-205ENST00000417137 TCF20Q9UGU0 1960 aaKnown RBP24.49■■□□□ 1.51
SMARCB1-205ENST00000417137 NOL4O94818 638 aa24.49■■□□□ 1.51
SMARCB1-205ENST00000417137 PAEPP09466 180 aa24.49■■□□□ 1.51
SMARCB1-205ENST00000417137 FAM200BP0CF97 657 aa24.49■■□□□ 1.51
SMARCB1-205ENST00000417137 ADORA2BP29275 332 aa24.49■■□□□ 1.51
SMARCB1-205ENST00000417137 COPB1P53618 953 aaKnown RBP24.49■■□□□ 1.51
SMARCB1-205ENST00000417137 DENND5BQ6ZUT9 1274 aa24.49■■□□□ 1.51
SMARCB1-205ENST00000417137 TMC8Q8IU68 726 aa24.49■■□□□ 1.51
SMARCB1-205ENST00000417137 KAT5Q92993 513 aa24.49■■□□□ 1.51
SMARCB1-205ENST00000417137 TRMT2BQ96GJ1 504 aaKnown RBP24.49■■□□□ 1.51
SMARCB1-205ENST00000417137 C1QTNF1Q9BXJ1 281 aa24.49■■□□□ 1.51
SMARCB1-205ENST00000417137 KRT82Q9NSB4 513 aa24.49■■□□□ 1.51
SMARCB1-205ENST00000417137 VDRP11473 427 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 HMGA1P17096 107 aaKnown RBP24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 ACO1P21399 889 aaKnown RBP24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 GABRR2P28476 465 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 IQCB1Q15051 598 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 ARHGAP15Q53QZ3 475 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 SGO2Q562F6 1265 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 ARHGAP17Q68EM7 881 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 ING5Q8WYH8 240 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 NXPE3Q969Y0 559 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 TCEAL4Q96EI5 215 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 MYRFLQ96LU7 910 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 KREMEN1Q96MU8 473 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 HSD3B7Q9H2F3 369 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 ATXN3LQ9H3M9 355 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 CBX8Q9HC52 389 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 ZNF334Q9HCZ1 680 aaPredicted RBP24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 LIMD1Q9UGP4 676 aa24.48■■□□□ 1.51
SMARCB1-205ENST00000417137 A0A1W2PRU2 124 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 CD19P15391 556 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 CCR2P41597 374 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 SLC8A3P57103 927 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 MTMR3Q13615 1198 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 PPP1R26Q5T8A7 1209 aaPredicted RBP24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 RNF135Q8IUD6 432 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 NPAS3Q8IXF0 933 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 NUP93Q8N1F7 819 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 MCRS1Q96EZ8 462 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 KCNK16Q96T55 309 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 CSNK1G1Q9HCP0 422 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 CD320Q9NPF0 282 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 ZMYM5Q9UJ78 669 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 C2orf16Q68DN1 1984 aa24.47■■□□□ 1.51
SMARCB1-205ENST00000417137 GOLGA6L19H0YKK7 550 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 RTN3O95197 1032 aaPredicted RBP24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 KRT5P13647 590 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 CEBPBP17676 345 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 CACNA2D1P54289 1103 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 MAP3K7CLP57077 242 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 KCNMA1Q12791 1236 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 GAREM2Q75VX8 874 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 RBBP8NLQ8NC74 664 aaPredicted RBP24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 SHKBP1Q8TBC3 707 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 SMOQ99835 787 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 DUSP16Q9BY84 665 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 COMMD8Q9NX08 183 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms