RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
ITGB1-204ENST00000417122 PCDHA5Q9Y5H7 936 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 ZNF638Q14966 1978 aaKnown RBP16.67■□□□□ 0.26
ITGB1-204ENST00000417122 SOBPA7XYQ1 873 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 ARNTLO00327 626 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 MAN2B1O00754 1011 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 TRIM66O15016 1216 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 TADA3O75528 432 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 TRIM49P0CI25 452 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 TRIM49CP0CI26 452 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 P4HA1P13674 534 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 GLULP15104 373 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 ANXA13P27216 316 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 AVPR1AP37288 418 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 PIK3CAP42336 1068 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 ENPEPQ07075 957 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 COBLL1Q53SF7 1204 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 TXNDC8Q6A555 127 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 SCARA5Q6ZMJ2 495 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 B3GALNT2Q8NCR0 500 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 SPATA20Q8TB22 786 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 BPIFB1Q8TDL5 484 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 CSGALNACT1Q8TDX6 532 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 CEP295NLQ96MC4 621 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 SMG9Q9H0W8 520 aaKnown RBP16.66■□□□□ 0.26
ITGB1-204ENST00000417122 SDCBP2Q9H190 292 aa16.66■□□□□ 0.26
ITGB1-204ENST00000417122 MRPS17Q9Y2R5 130 aaKnown RBP16.66■□□□□ 0.26
ITGB1-204ENST00000417122 SHISA7A6NL88 538 aa16.65■□□□□ 0.26
ITGB1-204ENST00000417122 CETN3O15182 167 aa16.65■□□□□ 0.26
ITGB1-204ENST00000417122 NCAM2O15394 837 aa16.65■□□□□ 0.26
ITGB1-204ENST00000417122 ASS1P00966 412 aaKnown RBP16.65■□□□□ 0.26
ITGB1-204ENST00000417122 HLA-DRAP01903 254 aa16.65■□□□□ 0.26
ITGB1-204ENST00000417122 TARSP26639 723 aaKnown RBP16.65■□□□□ 0.26
ITGB1-204ENST00000417122 GCLMP48507 274 aa16.65■□□□□ 0.26
ITGB1-204ENST00000417122 PPP3CAQ08209 521 aa16.65■□□□□ 0.26
ITGB1-204ENST00000417122 ARHGAP29Q52LW3 1261 aa16.65■□□□□ 0.26
ITGB1-204ENST00000417122 DENND5BQ6ZUT9 1274 aa16.65■□□□□ 0.26
ITGB1-204ENST00000417122 MON1AQ86VX9 555 aa16.65■□□□□ 0.26
ITGB1-204ENST00000417122 ELOA2Q8IYF1 753 aaPredicted RBP16.65■□□□□ 0.26
ITGB1-204ENST00000417122 CELF5Q8N6W0 485 aaKnown RBP16.65■□□□□ 0.26
ITGB1-204ENST00000417122 EEF2KMTQ96G04 330 aa16.65■□□□□ 0.26
ITGB1-204ENST00000417122 BCO2Q9BYV7 579 aa16.65■□□□□ 0.26
ITGB1-204ENST00000417122 PIAS3Q9Y6X2 628 aa16.65■□□□□ 0.26
ITGB1-204ENST00000417122 ANAPC1Q9H1A4 1944 aa16.64■□□□□ 0.26
ITGB1-204ENST00000417122 F8VP50 259 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 KINO60870 393 aaKnown RBP16.64■□□□□ 0.25
ITGB1-204ENST00000417122 MAGEA9P43362 315 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 SPOPLQ6IQ16 392 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 FAM3CQ92520 227 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 USP13Q92995 863 aaPredicted RBP16.64■□□□□ 0.25
ITGB1-204ENST00000417122 ZFYVE19Q96K21 471 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 TNIP3Q96KP6 325 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 C8orf48Q96LL4 319 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 TSG101Q99816 390 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 B3GNT5Q9BYG0 378 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 GTPBP4Q9BZE4 634 aaKnown RBP16.64■□□□□ 0.25
ITGB1-204ENST00000417122 IMPG2Q9BZV3 1241 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 ZNF518BQ9C0D4 1074 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 ELOVL4Q9GZR5 314 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 MMRN2Q9H8L6 949 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 TDP1Q9NUW8 608 aa16.64■□□□□ 0.25
ITGB1-204ENST00000417122 NDRG2Q9UN36 371 aaKnown RBP16.64■□□□□ 0.25
ITGB1-204ENST00000417122 KIF26AQ9ULI4 1882 aaPredicted RBP16.63■□□□□ 0.25
ITGB1-204ENST00000417122 CLDN5O00501 218 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 GADD45BO75293 160 aaPredicted RBP16.63■□□□□ 0.25
ITGB1-204ENST00000417122 EPB41P11171 864 aaKnown RBP16.63■□□□□ 0.25
ITGB1-204ENST00000417122 ASPAP45381 313 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 KPNA1P52294 538 aaPredicted RBP16.63■□□□□ 0.25
ITGB1-204ENST00000417122 CACNA2D1P54289 1103 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 MLLT6P55198 1093 aaPredicted RBP16.63■□□□□ 0.25
ITGB1-204ENST00000417122 MCCD1P59942 119 aaPredicted RBP16.63■□□□□ 0.25
ITGB1-204ENST00000417122 USP46P62068 366 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 PLCB2Q00722 1185 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 C1orf210Q8IVY1 113 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 ADSSL1Q8N142 457 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 TAS1R2Q8TE23 839 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 CLDN23Q96B33 292 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 KIF9Q9HAQ2 790 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 TMEM8AQ9HCN3 771 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 TRPC7Q9HCX4 862 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.63■□□□□ 0.252e-7■■■■■ 139.7
ITGB1-204ENST00000417122 THG1LQ9NWX6 298 aaKnown RBP16.63■□□□□ 0.25
ITGB1-204ENST00000417122 EHD2Q9NZN4 543 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 CCL26Q9Y258 94 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 ATP8B3O60423 1300 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 PATJQ8NI35 1801 aa16.63■□□□□ 0.25
ITGB1-204ENST00000417122 TRAV19A0A0A6YYK7 116 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 USP17L7P0C7H9 530 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 CCNE1P24864 410 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 GTF2H1P32780 548 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 NBL1P41271 181 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 NOP14P78316 857 aaKnown RBP16.62■□□□□ 0.25
ITGB1-204ENST00000417122 FZD5Q13467 585 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 ZNF268Q14587 947 aaPredicted RBP16.62■□□□□ 0.25
ITGB1-204ENST00000417122 KRT39Q6A163 491 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 ANKRD40Q6AI12 368 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 ISM2Q6H9L7 571 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 ACOT1Q86TX2 421 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 CCDC150Q8NCX0 1101 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 MSANTD3Q96H12 275 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms