RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 OR5B17Q8NGF7 314 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 TEPSINQ96N21 525 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 WDR83Q9BRX9 315 aaKnown RBP10.27□□□□□ -0.77
CD44-206ENST00000415148 TMEM121Q9BTD3 319 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 TARS2Q9BW92 718 aaKnown RBP10.27□□□□□ -0.77
CD44-206ENST00000415148 CADM1Q9BY67 442 aaKnown RBP10.27□□□□□ -0.77
CD44-206ENST00000415148 LHX5Q9H2C1 402 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 ZNF302Q9NR11 478 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 ARL8BQ9NVJ2 186 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 FBXO40Q9UH90 709 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 ZFP69BQ9UJL9 534 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 FER1L6Q2WGJ9 1857 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 KIAA1217Q5T5P2 1943 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 CLUHO75153 1309 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 LRRIQ4A6NIV6 560 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 TGDSO95455 350 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 IL1BP01584 269 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 ERFP50548 548 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 YWHAEP62258 255 aaKnown RBP10.26□□□□□ -0.77
CD44-206ENST00000415148 MTMR2Q13614 643 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 ACAP1Q15027 740 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 MSS51Q4VC12 460 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 C3orf62Q6ZUJ4 267 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 BBS12Q6ZW61 710 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 NLRP9Q7RTR0 991 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 ZNF276Q8N554 614 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 WDTC1Q8N5D0 677 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 BANPQ8N9N5 519 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 MZB1Q8WU39 189 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 SLC7A3Q8WY07 619 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 CPT1BQ92523 772 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 TMEM143Q96AN5 459 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 ATG4CQ96DT6 458 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 SAE1Q9UBE0 346 aaPredicted RBP10.26□□□□□ -0.77
CD44-206ENST00000415148 IGKV6D-21A0A0A0MT36 114 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 KRT36O76013 467 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 ITGBL1O95965 494 aaPredicted RBP10.26□□□□□ -0.77
CD44-206ENST00000415148 CST3P01034 146 aaPredicted RBP10.26□□□□□ -0.77
CD44-206ENST00000415148 PCK1P35558 622 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 EFNA5P52803 228 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 IRX1P78414 480 aaPredicted RBP10.26□□□□□ -0.77
CD44-206ENST00000415148 ZBTB41Q5SVQ8 909 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 WDR78Q5VTH9 848 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 PALM2Q8IXS6 379 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 NIF3L1Q9GZT8 377 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 MANSC1Q9H8J5 431 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 MYOZ2Q9NPC6 264 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 FBXO6Q9NRD1 293 aaPredicted RBP10.26□□□□□ -0.77
CD44-206ENST00000415148 CISHQ9NSE2 258 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 NMRK1Q9NWW6 199 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 WDR35Q9P2L0 1181 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 SLC17A7Q9P2U7 560 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 AGTPBP1Q9UPW5 1226 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 PPME1Q9Y570 386 aa10.26□□□□□ -0.77
CD44-206ENST00000415148 MYH9P35579 1960 aaKnown RBP10.26□□□□□ -0.77
CD44-206ENST00000415148 MED7O43513 233 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 ADCY3O60266 1144 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 CCDC22O60826 627 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 DNAJC6O75061 913 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 SPAG6O75602 509 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 AP1G2O75843 785 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 FAM155BO75949 473 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 IFNB1P01574 187 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 WEE2P0C1S8 567 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 ATP6V1C1P21283 382 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 KDELR1P24390 212 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 MARK3P27448 753 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 SSTR1P30872 391 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 RPL22P35268 128 aaKnown RBP10.25□□□□□ -0.77
CD44-206ENST00000415148 NRLP54845 237 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 BACE1P56817 501 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 OTUD4Q01804 1114 aaKnown RBP10.25□□□□□ -0.77
CD44-206ENST00000415148 SLC25A11Q02978 314 aaKnown RBP10.25□□□□□ -0.77
CD44-206ENST00000415148 DGKZQ13574 1117 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 TFDP1Q14186 410 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 DUOXA2Q1HG44 320 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 FNBP1LQ5T0N5 605 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 RNF220Q5VTB9 566 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 FOXB2Q5VYV0 432 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 ANKRD22Q5VYY1 191 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 SNRNP48Q6IEG0 339 aaKnown RBP10.25□□□□□ -0.77
CD44-206ENST00000415148 GPAT2Q6NUI2 795 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 RFX8Q6ZV50 586 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 APBB1IPQ7Z5R6 666 aaPredicted RBP10.25□□□□□ -0.77
CD44-206ENST00000415148 CLNKQ7Z7G1 428 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 CHSY1Q86X52 802 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 NIM1KQ8IY84 436 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 PDIK1LQ8N165 341 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 DCAKDQ8WVC6 231 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 WDR60Q8WVS4 1066 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 RSAD2Q8WXG1 361 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 PAFAH2Q99487 392 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 TRIM55Q9BYV6 548 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 DCLRE1BQ9H816 532 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 AS3MTQ9HBK9 375 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 NRBP2Q9NSY0 501 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 COL4A5P29400 1685 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.25□□□□□ -0.77
CD44-206ENST00000415148 IQANK1A0A1B0GTG1 560 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 ABLIM1O14639 778 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms