RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 CROTQ9UKG9 612 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 FLT4P35916 1363 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 C17orf113A0A1B0GUU1 675 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 TTC36A6NLP5 189 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 M0QYG6 137 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 SPTLC2O15270 562 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 TBC1D4O60343 1298 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 MAFKO60675 156 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 TADA3O75528 432 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 SLC22A3O75751 556 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 KLRK1P26718 216 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 PCSK1P29120 753 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 KIR3DL1P43629 444 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 DAG1Q14118 895 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 SPARCL1Q14515 664 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 CCNG2Q16589 344 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 MAPKAPK3Q16644 382 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 ADGRF1Q5T601 910 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 CD276Q5ZPR3 534 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 FAM109BQ6ICB4 259 aaPredicted RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 CYP2R1Q6VVX0 501 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 ZAR1Q86SH2 424 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 MAFAQ8NHW3 353 aaPredicted RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 UHMK1Q8TAS1 419 aaKnown RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 HTRA1Q92743 480 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 MAELQ96JY0 434 aaKnown RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 FCRL2Q96LA5 508 aaPredicted RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 TWSG1Q9GZX9 223 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 C7orf69Q9H7B7 122 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 PNPOQ9NVS9 261 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 COL20A1Q9P218 1284 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 EPS15L1Q9UBC2 864 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 ORC3Q9UBD5 711 aaPredicted RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 ADD3Q9UEY8 706 aaKnown RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 PA2G4Q9UQ80 394 aaKnown RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 PDE4DIPQ5VU43 2346 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 A0A088AWK7 358 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 TCRBV7S2A1N4TA0A589 114 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 BTN3A1O00481 513 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 TMEM63AO94886 807 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 ESR1P03372 595 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 HNRNPA1P09651 372 aaKnown RBP eCLIP2.86□□□□□ -1.95
MCF2-204ENST00000414978 SRGAP2BP0DMP2 458 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 ZSCAN22P10073 491 aaPredicted RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 PTGS1P23219 599 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 ECHS1P30084 290 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 ACSL1P33121 698 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 SERPINF1P36955 418 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 CLCN2P51788 898 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 CYP4F8P98187 520 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 ZACNQ401N2 412 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 SLC9C2Q5TAH2 1124 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 MAP3K21Q5TCX8 1036 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 MROH9Q5TGP6 573 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 FYB2Q5VWT5 728 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 OGFOD3Q6PK18 319 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 DPP9Q86TI2 863 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 RAB11FIP4Q86YS3 637 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 MIGA1Q8NAN2 632 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 ATP11CQ8NB49 1132 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 OR8H1Q8NGG4 311 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 HDAC2Q92769 488 aaKnown RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 TP53INP1Q96A56 240 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 C3orf49Q96BT1 292 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 BTBD1Q9H0C5 482 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 TAOK3Q9H2K8 898 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 ACAD9Q9H845 621 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 PCDHB16Q9NRJ7 776 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 MRPS18AQ9NVS2 196 aaKnown RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 NFKBIL1Q9UBC1 381 aaPredicted RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 AFF4Q9UHB7 1163 aaKnown RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 SLC45A2Q9UMX9 530 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 A0A087X0M5 115 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 A0A0B4J269 797 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 A0A1B0GX30 115 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 LCE2BO14633 110 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 CYP26A1O43174 497 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 DOK2O60496 412 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 OPHN1O60890 802 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 RASAL1O95294 804 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 ELF1P32519 619 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 MCAMP43121 646 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 POLD2P49005 469 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 CCT4P50991 539 aaKnown RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 SOX10P56693 466 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 MRPS9P82933 396 aaKnown RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 CACHD1Q5VU97 1274 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 CRTC1Q6UUV9 634 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 SEZ6L2Q6UXD5 910 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 SYT13Q7L8C5 426 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 TTC7BQ86TV6 843 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 GLB1L2Q8IW92 636 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 TEX11Q8IYF3 940 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 CARNMT1Q8N4J0 409 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 STPG3Q8N7X2 389 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 SPPL3Q8TCT6 385 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 MGARPQ8TDB4 240 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 NUP133Q8WUM0 1156 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 PIGBQ92521 554 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 CHFRQ96EP1 664 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms