RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 CCP110O43303 1012 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 ABLIM3O94929 683 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 OR4Q2P0C623 313 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 TMEM253P0C7T8 217 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 FAM200BP0CF97 657 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 MYBL1P10243 752 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 PLA2G4AP47712 749 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 GABRB2P47870 512 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 GALCP54803 685 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 SLC8A3P57103 927 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 PDE4CQ08493 712 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 RAB33AQ14088 237 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 TCEAL1Q15170 157 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 SLC39A12Q504Y0 691 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 TPGS2Q68CL5 300 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 PDE12Q6L8Q7 609 aaKnown RBP15.07■□□□□ 0
SF3B1-204ENST00000414963 VSTM1Q6UX27 236 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 MON1BQ7L1V2 547 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 TMEM110Q86TL2 294 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 SPATA2LQ8IUW3 424 aaPredicted RBP15.07■□□□□ 0
SF3B1-204ENST00000414963 REXO1L1PQ8IX06 675 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 MCOLN2Q8IZK6 566 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 C1orf131Q8NDD1 294 aaKnown RBP15.07■□□□□ 0
SF3B1-204ENST00000414963 KCTD13Q8WZ19 329 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 TRIM11Q96F44 468 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 HSFY1Q96LI6 401 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 NOX5Q96PH1 765 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 MED10Q9BTT4 135 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 HSFX1Q9UBD0 423 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 PCDHB5Q9Y5E4 795 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 CDY1Q9Y6F8 540 aa15.07■□□□□ 0
SF3B1-204ENST00000414963 TNRC18O15417 2968 aaPredicted RBP15.07■□□□□ 0
SF3B1-204ENST00000414963 A0A1W2PPC1 479 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 RCCD1A6NED2 376 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 TMCO5BA8MYB1 307 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 H3BNC9 293 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 FSCN2O14926 492 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 ADAM12O43184 909 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 AP1G2O75843 785 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 CXCL14O95715 111 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 C1RP00736 705 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 DNAJB1P25685 340 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 OR1D2P34982 312 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 SNX16P57768 344 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 ERVFC1P60507 584 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 GPC5P78333 572 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 ROR1Q01973 937 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 MLLT1Q03111 559 aaPredicted RBP15.06■□□□□ 0
SF3B1-204ENST00000414963 PDCLQ13371 301 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 PMF1Q6P1K2 205 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 CLEC20AQ6ZU45 233 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 SPRED2Q7Z698 418 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 KIAA1328Q86T90 577 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 ERICH1Q86X53 443 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 MRPL43Q8N983 215 aaKnown RBP15.06■□□□□ 0
SF3B1-204ENST00000414963 MSANTD4Q8NCY6 345 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 ZNF461Q8TAF7 563 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 SPPL2BQ8TCT7 592 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 POF1BQ8WVV4 589 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 PPP1R13BQ96KQ4 1090 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 SMOQ99835 787 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 PACSIN1Q9BY11 444 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 MIS12Q9H081 205 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 NKX2-4Q9H2Z4 354 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 ALG13Q9NP73 1137 aaKnown RBP15.06■□□□□ 0
SF3B1-204ENST00000414963 PNPLA8Q9NP80 782 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 NGRNQ9NPE2 291 aaKnown RBP15.06■□□□□ 0
SF3B1-204ENST00000414963 AVENQ9NQS1 362 aaPredicted RBP15.06■□□□□ 0
SF3B1-204ENST00000414963 KRT82Q9NSB4 513 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 ADAM22Q9P0K1 906 aa15.06■□□□□ 0
SF3B1-204ENST00000414963 AFF4Q9UHB7 1163 aaKnown RBP15.06■□□□□ 0
SF3B1-204ENST00000414963 A0A0A6YYK5 440 aaPredicted RBP15.05■□□□□ -0
SF3B1-204ENST00000414963 MTMR11A4FU01 709 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 GOLGA6L9A6NEM1 432 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 C2CD2LO14523 706 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 VNN2O95498 520 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 CYP1A2P05177 515 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 CALB1P05937 261 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 CPB1P15086 417 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 BDNFP23560 247 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 ARHGAP25P42331 645 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 ACADSBP45954 432 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 NDUFV1P49821 464 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 GSCP56915 257 aaPredicted RBP15.05■□□□□ -0
SF3B1-204ENST00000414963 KIF5AQ12840 1032 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 CAMK1Q14012 370 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 PTPN20Q4JDL3 420 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 RNF19BQ6ZMZ0 732 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 TMC7Q7Z402 723 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 ZMIZ2Q8NF64 920 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 CTNNBL1Q8WYA6 563 aaPredicted RBP15.05■□□□□ -0
SF3B1-204ENST00000414963 C18orf8Q96DM3 657 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 C8orf48Q96LL4 319 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 CEP295NLQ96MC4 621 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 CPXM1Q96SM3 734 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 TCF25Q9BQ70 676 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 TSGA10Q9BZW7 698 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 LACRTQ9GZZ8 138 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 LMAN2LQ9H0V9 348 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 SLC28A3Q9HAS3 691 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms