RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 CLCN6P51797 869 aa11.92□□□□□ -0.5
LINC00330-201ENST00000414562 BRD3Q15059 726 aa11.92□□□□□ -0.5
LINC00330-201ENST00000414562 ZKSCAN8Q15776 578 aaPredicted RBP11.92□□□□□ -0.5
LINC00330-201ENST00000414562 CCDC142Q17RM4 750 aa11.92□□□□□ -0.5
LINC00330-201ENST00000414562 TIGD5Q53EQ6 642 aa11.92□□□□□ -0.5
LINC00330-201ENST00000414562 DNAJC24Q6P3W2 148 aa11.92□□□□□ -0.5
LINC00330-201ENST00000414562 PSRC1Q6PGN9 363 aaPredicted RBP11.92□□□□□ -0.5
LINC00330-201ENST00000414562 TMCO3Q6UWJ1 677 aa11.92□□□□□ -0.5
LINC00330-201ENST00000414562 LIMS2Q7Z4I7 341 aa11.92□□□□□ -0.5
LINC00330-201ENST00000414562 HERC6Q8IVU3 1022 aa11.92□□□□□ -0.5
LINC00330-201ENST00000414562 PNKPQ96T60 521 aa11.92□□□□□ -0.5
LINC00330-201ENST00000414562 DNAI2Q9GZS0 605 aa11.92□□□□□ -0.5
LINC00330-201ENST00000414562 LHX5Q9H2C1 402 aa11.92□□□□□ -0.5
LINC00330-201ENST00000414562 SYNCQ9H7C4 482 aa11.92□□□□□ -0.5
LINC00330-201ENST00000414562 KIAA1257Q9ULG3 409 aa11.92□□□□□ -0.5
LINC00330-201ENST00000414562 PRG3Q9Y2Y8 225 aaPredicted RBP11.92□□□□□ -0.5
LINC00330-201ENST00000414562 M0QYV0 167 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 NRP1O14786 923 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 ERLIN1O75477 346 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 CDH5P33151 784 aaPredicted RBP11.91□□□□□ -0.5
LINC00330-201ENST00000414562 TAF6P49848 677 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 CDR1P51861 262 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 PTP4A2Q12974 167 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 MAMLD1Q13495 774 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 SOWAHAQ2M3V2 549 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 SV2CQ496J9 727 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 PLEKHA7Q6IQ23 1121 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 TAS1R1Q7RTX1 841 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 OR6B3Q8NGW1 331 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 B3GALT6Q96L58 329 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 NAP1L3Q99457 506 aaPredicted RBP11.91□□□□□ -0.5
LINC00330-201ENST00000414562 MRPL45Q9BRJ2 306 aaKnown RBP11.91□□□□□ -0.5
LINC00330-201ENST00000414562 TSPYL1Q9H0U9 437 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 CARD9Q9H257 536 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 SLC38A7Q9NVC3 462 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 TIMM13Q9Y5L4 95 aaPredicted RBP11.91□□□□□ -0.5
LINC00330-201ENST00000414562 NR2E3Q9Y5X4 410 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 TSC2P49815 1807 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 TARSL2A2RTX5 802 aaKnown RBP11.91□□□□□ -0.5
LINC00330-201ENST00000414562 CCDC66A2RUB6 948 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 KPNA7A9QM74 516 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 KRIT1O00522 736 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 MICAL2O94851 1124 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 EFEMP2O95967 443 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 AARSP49588 968 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC00330-201ENST00000414562 ZNF211Q13398 564 aaPredicted RBP11.91□□□□□ -0.5
LINC00330-201ENST00000414562 CLUL1Q15846 466 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 CNGA2Q16280 664 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 LONRF2Q1L5Z9 754 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 SEL1L2Q5TEA6 688 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 C8orf74Q6P047 294 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 DCUN1D2Q6PH85 259 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 OSTM1Q86WC4 334 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 FEZF2Q8TBJ5 459 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 KBTBD7Q8WVZ9 684 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 KRT35Q92764 455 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 RNPC3Q96LT9 517 aaKnown RBP11.91□□□□□ -0.5
LINC00330-201ENST00000414562 GPR62Q9BZJ7 368 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 TRIM7Q9C029 511 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 SNX25Q9H3E2 840 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 ARFGAP3Q9NP61 516 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 STRIP2Q9ULQ0 834 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 L1RE1Q9UN81 338 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC00330-201ENST00000414562 SLC4A7Q9Y6M7 1214 aa11.91□□□□□ -0.5
LINC00330-201ENST00000414562 EFCAB14O75071 495 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 FGGP02679 453 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 ATP2A2P16615 1042 aaKnown RBP11.9□□□□□ -0.5
LINC00330-201ENST00000414562 CTNNA2P26232 953 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 PBX2P40425 430 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 SLC1A1P43005 524 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 OR1G1P47890 313 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 BCAR1P56945 870 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 RNASELQ05823 741 aaKnown RBP11.9□□□□□ -0.5
LINC00330-201ENST00000414562 STILQ15468 1287 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 CYP4A22Q5TCH4 519 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 ACOT1Q86TX2 421 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 ABI1Q8IZP0 508 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 RASGEF1CQ8N431 466 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 WDTC1Q8N5D0 677 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.9□□□□□ -0.5
LINC00330-201ENST00000414562 URGCPQ8TCY9 931 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 ALG3Q92685 438 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 KRT12Q99456 494 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 RTP3Q9BQQ7 232 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 LRRC1Q9BTT6 524 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 AP1M1Q9BXS5 423 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 RAB21Q9UL25 225 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 TRIOBPQ9H2D6 2365 aa11.9□□□□□ -0.5
LINC00330-201ENST00000414562 MYO9BQ13459 2157 aa11.9□□□□□ -0.51
LINC00330-201ENST00000414562 CCDC151A5D8V7 595 aa11.89□□□□□ -0.51
LINC00330-201ENST00000414562 A8MXQ7 604 aa11.89□□□□□ -0.51
LINC00330-201ENST00000414562 GOLGA8SH3BPF8 625 aa11.89□□□□□ -0.51
LINC00330-201ENST00000414562 O00370 1275 aa11.89□□□□□ -0.51
LINC00330-201ENST00000414562 HUS1O60921 280 aa11.89□□□□□ -0.51
LINC00330-201ENST00000414562 B3GAT3O94766 335 aa11.89□□□□□ -0.51
LINC00330-201ENST00000414562 PROSCO94903 275 aa11.89□□□□□ -0.51
LINC00330-201ENST00000414562 GJB6O95452 261 aa11.89□□□□□ -0.51
LINC00330-201ENST00000414562 LMO2P25791 158 aa11.89□□□□□ -0.51
LINC00330-201ENST00000414562 CTNNA1P35221 906 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms