RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 C2orf69Q8N8R5 385 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 FAM71DQ8N9W8 422 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 RBBP8NLQ8NC74 664 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 C3orf20Q8ND61 904 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 GDAP1Q8TB36 358 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 COG1Q8WTW3 980 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 UCMAQ8WVF2 138 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 SLC5A11Q8WWX8 675 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ASB12Q8WXK4 309 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 DDX1Q92499 740 aaKnown RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 PTP4A1Q93096 173 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 PPP1R14BQ96C90 147 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 DTNBP1Q96EV8 351 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ZSCAN31Q96LW9 406 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 LRGUKQ96M69 825 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 CMTM3Q96MX0 182 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ATP6V0BQ99437 205 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 DDX50Q9BQ39 737 aaKnown RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 KIFC3Q9BVG8 833 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TMEM120AQ9BXJ8 343 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 BHMT2Q9H2M3 363 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 BICC1Q9H694 974 aaKnown RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ZNF552Q9H707 407 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 JMJD4Q9H9V9 463 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 UCK1Q9HA47 277 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 GCM1Q9NP62 436 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ITM2CQ9NQX7 267 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TAS2R3Q9NYW6 316 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 HSPBP1Q9NZL4 362 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 RGL1Q9NZL6 768 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 EHD3Q9NZN3 535 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TMEM59LQ9UK28 342 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 VPS28Q9UK41 221 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 BAG5Q9UL15 447 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 KIAA1257Q9ULG3 409 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 LIMCH1Q9UPQ0 1083 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 EXOC7Q9UPT5 735 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TMEM5Q9Y2B1 443 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ZNF510Q9Y2H8 683 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 PCDHA11Q9Y5I1 949 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 KIF7Q2M1P5 1343 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TTC41PQ6P2S7 1318 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 WDR19Q8NEZ3 1342 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 PASKQ96RG2 1323 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 MAGEB16A2A368 324 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 CTAGE15A4D2H0 777 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 E9PMD0 336 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 GOLGA8SH3BPF8 625 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 NDUFS8O00217 210 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 KRIT1O00522 736 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 HDAC3O15379 428 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ADCY3O60266 1144 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 KERAO60938 352 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 EFCAB14O75071 495 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 NIPSNAP2O75323 286 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 PIAS2O75928 621 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 OR5F1O95221 314 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 LARGE1O95461 756 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 CHGBP05060 677 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 RB1P06400 928 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ENO2P09104 434 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 CLTBP09497 229 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ZGLP1P0C6A0 271 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 UBTFL6P0CB48 400 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 CTAGE8P0CG41 777 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 UBL4AP11441 157 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 INSRRP14616 1297 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 VEGFAP15692 232 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 GCFC2P16383 781 aaKnown RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 PTPN2P17706 415 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 POU3F2P20265 443 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 CTNNA2P26232 953 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ANXA13P27216 316 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 AXLP30530 894 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 HOXD13P35453 343 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 GIPRP48546 466 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 DIO1P49895 249 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 CLCN4P51793 760 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 HK2P52789 917 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 SLC12A3P55017 1021 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 MAP3K7CLP57077 242 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 YBEYP58557 167 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 STARD6P59095 220 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 TUBA4AP68366 448 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 GUCY1B3Q02153 619 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 HSPA14Q0VDF9 509 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 CETN1Q12798 172 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 SNX1Q13596 522 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 PWP1Q13610 501 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 BYSLQ13895 437 aaKnown RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 GIT2Q14161 759 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 SART3Q15020 963 aaKnown RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 PTPAQ15257 358 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 DPYSL2Q16555 572 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 AAK1Q2M2I8 961 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 TMEM266Q2M3C6 531 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 LETM2Q2VYF4 491 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 INAVAQ3KP66 663 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 Q3ZCU0 254 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms