RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TAS1R2Q8TE23 839 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 TMEM174Q8WUU8 243 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 FAM3CQ92520 227 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 E2F7Q96AV8 911 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 FUBP3Q96I24 572 aaKnown RBP eCLIP10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 GSDMAQ96QA5 445 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 SLC22A12Q96S37 553 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 DDX23Q9BUQ8 820 aaKnown RBP10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 BCO2Q9BYV7 579 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 GKN1Q9NS71 199 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 SPATA6Q9NWH7 488 aaPredicted RBP10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 GTSE1Q9NYZ3 720 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 DLGAP2Q9P1A6 1054 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 PIAS3Q9Y6X2 628 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 ANK1P16157 1881 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 C2orf78A6NCI8 922 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 TRIM49BA6NDI0 452 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 BIN1O00499 593 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 CHADO15335 359 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 TADA3O75528 432 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 FAM163BP0C2L3 166 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 MAGEA11P43364 429 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 NDST1P52848 882 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 NFIL3Q16649 462 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 ZCWPW2Q504Y3 356 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 TCERG1LQ5VWI1 586 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 TRIM68Q6AZZ1 485 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 VSTM1Q6UX27 236 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 INTS8Q75QN2 995 aaKnown RBP10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 FRMD5Q7Z6J6 570 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 MON1AQ86VX9 555 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 C1orf210Q8IVY1 113 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 CELF5Q8N6W0 485 aaKnown RBP10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 ARL14EPQ8N8R7 260 aaPredicted RBP10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 RIN3Q8TB24 985 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 DNASE1L2Q92874 299 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 USP13Q92995 863 aaPredicted RBP10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 TIGD1Q96MW7 591 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 KCNK16Q96T55 309 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 TSG101Q99816 390 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 IRF2BPLQ9H1B7 796 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 VRTNQ9H8Y1 702 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 LMAN1LQ9HAT1 526 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 APOBEC3GQ9HC16 384 aaKnown RBP10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 TDP1Q9NUW8 608 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 TMEM30AQ9NV96 361 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 THG1LQ9NWX6 298 aaKnown RBP10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 UXTQ9UBK9 157 aaPredicted RBP10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 HMGXB4Q9UGU5 601 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 HOOK1Q9UJC3 728 aaKnown RBP10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 MAN1B1Q9UKM7 699 aa10.84□□□□□ -0.67
NCKIPSD-202ENST00000413374 ARNTLO00327 626 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 MAN2B1O00754 1011 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 TRIM66O15016 1216 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 MAPK13O15264 365 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 KINO60870 393 aaKnown RBP10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 ASS1P00966 412 aaKnown RBP10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 EPB41P11171 864 aaKnown RBP10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 P4HA1P13674 534 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 CCDC130P13994 396 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 CD44P16070 742 aaKnown RBP10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 CD58P19256 250 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 CSTF1Q05048 431 aaKnown RBP10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 FCHO2Q0JRZ9 810 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 FZD5Q13467 585 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 ARHGAP29Q52LW3 1261 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 DCAF17Q5H9S7 520 aaPredicted RBP10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 KLHL10Q6JEL2 608 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 TSSK4Q6SA08 328 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 DENND5BQ6ZUT9 1274 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 PAQR9Q6ZVX9 377 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 ADSSL1Q8N142 457 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 C12orf29Q8N999 325 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 SEMA4DQ92854 862 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 SPATA17Q96L03 361 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 MYRFLQ96LU7 910 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 NELL2Q99435 816 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 RBM12Q9NTZ6 932 aaKnown RBP10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 FAM49BQ9NUQ9 324 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 TRPM5Q9NZQ8 1165 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 CHORDC1Q9UHD1 332 aaPredicted RBP10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 MRPS17Q9Y2R5 130 aaKnown RBP10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 R4GN57 208 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 DOCK8Q8NF50 2099 aa10.83□□□□□ -0.68
NCKIPSD-202ENST00000413374 WDFY4Q6ZS81 3184 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 TRAV19A0A0A6YYK7 116 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 NCAM2O15394 837 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 LAMTOR5O43504 91 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 AP1G2O75843 785 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 CKMP06732 381 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 USP17L7P0C7H9 530 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 ARSAP15289 507 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 HDCP19113 662 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 DDX6P26196 483 aaKnown RBP eCLIP10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 ADORA2BP29275 332 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 ASPAP45381 313 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 STX17P56962 302 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 TAF10Q12962 218 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 CAMK4Q16566 473 aa10.82□□□□□ -0.68
NCKIPSD-202ENST00000413374 EDRF1Q3B7T1 1238 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms