RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 L3MBTL1Q9Y468 752 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 PODXLO00592 558 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 PSTPIP1O43586 416 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 KRT19P08727 400 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 CDC25CP30307 473 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 CDH5P33151 784 aaPredicted RBP13.69□□□□□ -0.22
LITAF-203ENST00000413364 FLT3P36888 993 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 SEC24CP53992 1094 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 SESN3P58005 492 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 MTMR3Q13615 1198 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 KCTD19Q17RG1 926 aaPredicted RBP13.69□□□□□ -0.22
LITAF-203ENST00000413364 ZNF394Q53GI3 561 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 ZNF667Q5HYK9 610 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 ANKRD20A2Q5SQ80 823 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 ANKRD20A1Q5TYW2 823 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 ANKRD20A3Q5VUR7 823 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 JADE1Q6IE81 842 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 CCDC137Q6PK04 289 aaKnown RBP13.69□□□□□ -0.22
LITAF-203ENST00000413364 KIAA0319LQ8IZA0 1049 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 AGAP11Q8TF27 550 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 TFAP2BQ92481 460 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 SEC16BQ96JE7 1060 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 LRRC19Q9H756 370 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 TRPV5Q9NQA5 729 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 ZDHHC18Q9NUE0 388 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 PLAAQ9Y263 795 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 TLR3O15455 904 aaKnown RBP13.68□□□□□ -0.22
LITAF-203ENST00000413364 TSPAN1O60635 241 aa13.68□□□□□ -0.22
LITAF-203ENST00000413364 GBP1P32455 592 aa13.68□□□□□ -0.22
LITAF-203ENST00000413364 UAP1Q16222 522 aaPredicted RBP13.68□□□□□ -0.22
LITAF-203ENST00000413364 GKAP1Q5VSY0 366 aaPredicted RBP13.68□□□□□ -0.22
LITAF-203ENST00000413364 TMC3Q7Z5M5 1100 aa13.68□□□□□ -0.22
LITAF-203ENST00000413364 ZNF410Q86VK4 478 aa13.68□□□□□ -0.22
LITAF-203ENST00000413364 RHOT1Q8IXI2 618 aa13.68□□□□□ -0.22
LITAF-203ENST00000413364 CXorf38Q8TB03 319 aa13.68□□□□□ -0.22
LITAF-203ENST00000413364 VCXQ9H320 206 aa13.68□□□□□ -0.22
LITAF-203ENST00000413364 CIDEBQ9UHD4 219 aa13.68□□□□□ -0.22
LITAF-203ENST00000413364 IP6K2Q9UHH9 426 aa13.68□□□□□ -0.22
LITAF-203ENST00000413364 ZNF236Q9UL36 1845 aa13.68□□□□□ -0.22
LITAF-203ENST00000413364 TCRBV5S1A1TA0A578 114 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 TMEM191CA6NGB0 347 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 TMEM221A6NGB7 291 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 TMCC1O94876 653 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 CCDC166P0CW27 439 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 ZFXP17010 805 aaPredicted RBP13.67□□□□□ -0.22
LITAF-203ENST00000413364 ATICP31939 592 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 TAF11Q15544 211 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 SLC10A6Q3KNW5 377 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 FMO2Q99518 471 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 VCX3BQ9H321 246 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 VCX3AQ9NNX9 186 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 PAIP2BQ9ULR5 123 aaKnown RBP13.67□□□□□ -0.22
LITAF-203ENST00000413364 SNX24Q9Y343 169 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 RRN3P2A6NIE6 340 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 H0YGN5 161 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 ADCY6O43306 1168 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 KRT14P02533 472 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 PAEPP09466 180 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 ATP2A2P16615 1042 aaKnown RBP13.67□□□□□ -0.22
LITAF-203ENST00000413364 INHBCP55103 352 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 TAS2R40P59535 323 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 LACTBP83111 547 aaPredicted RBP13.67□□□□□ -0.22
LITAF-203ENST00000413364 LMNB2Q03252 620 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 WDR72Q3MJ13 1102 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 SH2D4BQ5SQS7 431 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 CCDC105Q8IYK2 499 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 KATNAL2Q8IYT4 538 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 WDTC1Q8N5D0 677 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 SLCO2A1Q92959 643 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 TXLNGYQ9BZA5 131 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 VRTNQ9H8Y1 702 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.67□□□□□ -0.22
LITAF-203ENST00000413364 GRHL1Q9NZI5 618 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 NFS1Q9Y697 457 aa13.67□□□□□ -0.22
LITAF-203ENST00000413364 MED7O43513 233 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 GJB6O95452 261 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 ITGB3P05106 788 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 RAP1GAPP47736 663 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 DHX9Q08211 1270 aaKnown RBP13.66□□□□□ -0.22
LITAF-203ENST00000413364 TMEM132DQ14C87 1099 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 SPRED3Q2MJR0 410 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 SGO2Q562F6 1265 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 SPDYCQ5MJ68 293 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 DENND1BQ6P3S1 775 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 DNAJC24Q6P3W2 148 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 ZDHHC24Q6UX98 284 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 SLC35B4Q969S0 331 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 ZCWPW1Q9H0M4 648 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 SDCBP2Q9H190 292 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 LHX5Q9H2C1 402 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 CYP3A43Q9HB55 503 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 RRAGCQ9HB90 399 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 PARP2Q9UGN5 583 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 CPA4Q9UI42 421 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 MGAMO43451 1857 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 TRAPPC3O43617 180 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 GSTA2P09210 222 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 RPL21P46778 160 aaKnown RBP13.66□□□□□ -0.22
LITAF-203ENST00000413364 PSMD7P51665 324 aa13.66□□□□□ -0.22
LITAF-203ENST00000413364 RAD23BP54727 409 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms