RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PIP4K2AP48426 406 aaPredicted RBP5.46□□□□□ -1.54
HERC4-205ENST00000412272 GCNT1Q02742 428 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 GFPT1Q06210 699 aaPredicted RBP5.46□□□□□ -1.54
HERC4-205ENST00000412272 STK3Q13188 491 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 HSP90AA4PQ58FG1 418 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 NANOGP8Q6NSW7 305 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 OR8H1Q8NGG4 311 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 MGARPQ8TDB4 240 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 TMC2Q8TDI7 906 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 NOC3LQ8WTT2 800 aaKnown RBP5.46□□□□□ -1.54
HERC4-205ENST00000412272 FOXJ1Q92949 421 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 VPS33AQ96AX1 596 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 ARL5BQ96KC2 179 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 ELAC2Q9BQ52 826 aaKnown RBP5.46□□□□□ -1.54
HERC4-205ENST00000412272 TRIM15Q9C019 465 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 ADAM7Q9H2U9 754 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 SH2D4AQ9H788 454 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 NLRC4Q9NPP4 1024 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 ATP13A2Q9NQ11 1180 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 ENAMQ9NRM1 1142 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 EMILIN3Q9NT22 766 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 DIMT1Q9UNQ2 313 aaKnown RBP5.46□□□□□ -1.54
HERC4-205ENST00000412272 DTX4Q9Y2E6 619 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.46□□□□□ -1.54
HERC4-205ENST00000412272 ADAMTS2O95450 1211 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 HMGN1P05114 100 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 CYP3A5P20815 502 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 CASP1P29466 404 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 RFC1P35251 1148 aaPredicted RBP5.46□□□□□ -1.54
HERC4-205ENST00000412272 CYLC1P35663 651 aaPredicted RBP5.46□□□□□ -1.54
HERC4-205ENST00000412272 CCR10P46092 362 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 SLC34A1Q06495 639 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 RTP2Q5QGT7 225 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 NELFCDQ8IXH7 590 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 COLGALT2Q8IYK4 626 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 ADSSL1Q8N142 457 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 IPMKQ8NFU5 416 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 TRIM47Q96LD4 638 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 CRLF2Q9HC73 371 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 SLC35C2Q9NQQ7 365 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 FETUBQ9UGM5 382 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 GTF2IRD1Q9UHL9 959 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 SMG5Q9UPR3 1016 aaKnown RBP5.46□□□□□ -1.54
HERC4-205ENST00000412272 APOBEC2Q9Y235 224 aaKnown RBP5.46□□□□□ -1.54
HERC4-205ENST00000412272 USTQ9Y2C2 406 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 TOPAZ1Q8N9V7 1692 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 MYH6P13533 1939 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 LAMB4A4D0S4 1761 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 POM121CA8CG34 1229 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 RAD51BO15315 384 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 PHF2O75151 1096 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 TBX10O75333 385 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 C6orf222P0C671 652 aaPredicted RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 PDIA3P30101 505 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 IDUAP35475 653 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 PHKA1P46020 1223 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 VCPP55072 806 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 ROR1Q01973 937 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 HNRNPDQ14103 355 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 C12orf60Q5U649 245 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 KSR2Q6VAB6 950 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 IKBIPQ70UQ0 350 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 BTN2A1Q7KYR7 527 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 GPR142Q7Z601 462 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ERI1Q8IV48 349 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 UNC45BQ8IWX7 931 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 MAGEB6Q8N7X4 407 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 OR7D4Q8NG98 312 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ZNF507Q8TCN5 953 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 SYTL5Q8TDW5 730 aaPredicted RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 AFG1LQ8WV93 481 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 CASKIN2Q8WXE0 1202 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 HDAC2Q92769 488 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 ZNF717Q9BY31 904 aaPredicted RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 HOXD1Q9GZZ0 328 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ACAD9Q9H845 621 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 TBC1D22BQ9NU19 505 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 KBTBD4Q9NVX7 518 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 FAM8A1Q9UBU6 413 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 DNAJB4Q9UDY4 337 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 KCNH3Q9ULD8 1083 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 GUCA1BQ9UMX6 200 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 PALLDQ8WX93 1383 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 LRP6O75581 1613 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 FLT1P17948 1338 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 PCDH11YQ9BZA8 1340 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ZNF185O15231 689 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 MAPK13O15264 365 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ATG13O75143 517 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 DBTP11182 482 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 ITGAXP20702 1163 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 NR4A1P22736 598 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 LONP1P36776 959 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 MAGEA11P43364 429 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ASMTP46597 345 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 HSPA13P48723 471 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 DAB2P98082 770 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 OTUD4Q01804 1114 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 CREB5Q02930 508 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ALX1Q15699 326 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms